RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 IZUMO4Q1ZYL8 232 aa13.22□□□□□ -0.29
SMAD3-210ENST00000559092 BTNL8Q6UX41 500 aa13.22□□□□□ -0.29
SMAD3-210ENST00000559092 RBPMS2Q6ZRY4 209 aaKnown RBP13.22□□□□□ -0.29
SMAD3-210ENST00000559092 FAM219AQ8IW50 185 aa13.22□□□□□ -0.29
SMAD3-210ENST00000559092 UBAC2Q8NBM4 344 aa13.22□□□□□ -0.29
SMAD3-210ENST00000559092 MUC7Q8TAX7 377 aa13.22□□□□□ -0.29
SMAD3-210ENST00000559092 MISP3Q96FF7 219 aa13.22□□□□□ -0.29
SMAD3-210ENST00000559092 TMEM222Q9H0R3 208 aa13.22□□□□□ -0.29
SMAD3-210ENST00000559092 TEX13DA0A0J9YY54 714 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-210ENST00000559092 FABP12A6NFH5 140 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 C15orf62A8K5M9 175 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 NUPL2O15504 423 aaKnown RBP13.21□□□□□ -0.29
SMAD3-210ENST00000559092 ST8SIA3O43173 380 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 IFNA17P01571 189 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 TNFSF8P32971 234 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 SNCAP37840 140 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 DHODHQ02127 395 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 FAAP20Q6NZ36 180 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 DEFB125Q8N687 156 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 OR52B4Q8NGK2 314 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 OR4C16Q8NGL9 310 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 MCFD2Q8NI22 146 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 SCGB3A2Q96PL1 93 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 PDCD10Q9BUL8 212 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 NAA60Q9H7X0 242 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 GPR132Q9UNW8 380 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 CEPT1Q9Y6K0 416 aa13.21□□□□□ -0.29
SMAD3-210ENST00000559092 MT-CO2P00403 227 aa13.2□□□□□ -0.3
SMAD3-210ENST00000559092 SUB1P53999 127 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMAD3-210ENST00000559092 AARDQ4LEZ3 155 aa13.2□□□□□ -0.3
SMAD3-210ENST00000559092 PVRIGQ6DKI7 326 aa13.2□□□□□ -0.3
SMAD3-210ENST00000559092 LAMTOR1Q6IAA8 161 aa13.2□□□□□ -0.3
SMAD3-210ENST00000559092 SLC35G3Q8N808 338 aa13.2□□□□□ -0.3
SMAD3-210ENST00000559092 OR51S1Q8NGJ8 323 aa13.2□□□□□ -0.3
SMAD3-210ENST00000559092 GLYATL2Q8WU03 294 aa13.2□□□□□ -0.3
SMAD3-210ENST00000559092 SCP2D1Q9UJQ7 156 aa13.2□□□□□ -0.3
SMAD3-210ENST00000559092 RBMY1BA6NDE4 496 aaKnown RBP13.19□□□□□ -0.3
SMAD3-210ENST00000559092 RBMY1EA6NEQ0 496 aaKnown RBP13.19□□□□□ -0.3
SMAD3-210ENST00000559092 CRYM-AS1A6NIL9 109 aa13.19□□□□□ -0.3
SMAD3-210ENST00000559092 CORTO00230 105 aa13.19□□□□□ -0.3
SMAD3-210ENST00000559092 TSPAN4O14817 238 aa13.19□□□□□ -0.3
SMAD3-210ENST00000559092 SCAF4O95104 1147 aaKnown RBP13.19□□□□□ -0.3
SMAD3-210ENST00000559092 OR5AC1P0C628 307 aa13.19□□□□□ -0.3
SMAD3-210ENST00000559092 RBMY1DP0C7P1 496 aaKnown RBP13.19□□□□□ -0.3
SMAD3-210ENST00000559092 OR52E5Q8NH55 327 aa13.19□□□□□ -0.3
SMAD3-210ENST00000559092 RNASE11Q8TAA1 199 aaKnown RBP13.19□□□□□ -0.3
SMAD3-210ENST00000559092 RBPMSQ93062 196 aaKnown RBP13.19□□□□□ -0.3
SMAD3-210ENST00000559092 SPAG8Q99932 426 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-210ENST00000559092 C20orf24Q9BUV8 137 aa13.19□□□□□ -0.3
SMAD3-210ENST00000559092 SRD5A3Q9H8P0 318 aa13.19□□□□□ -0.3
SMAD3-210ENST00000559092 ENY2Q9NPA8 101 aa13.19□□□□□ -0.3
SMAD3-210ENST00000559092 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-210ENST00000559092 CACFD1Q9UGQ2 172 aa13.19□□□□□ -0.3
SMAD3-210ENST00000559092 ETV6P41212 452 aa13.18□□□□□ -0.3
SMAD3-210ENST00000559092 NPBWR1P48145 328 aa13.18□□□□□ -0.3
SMAD3-210ENST00000559092 SPCS3P61009 180 aa13.18□□□□□ -0.3
SMAD3-210ENST00000559092 DUSP18Q8NEJ0 188 aa13.18□□□□□ -0.3
SMAD3-210ENST00000559092 OR10C1Q96KK4 312 aa13.18□□□□□ -0.3
SMAD3-210ENST00000559092 EDA2RQ9HAV5 297 aa13.18□□□□□ -0.3
SMAD3-210ENST00000559092 KCNIP3Q9Y2W7 256 aa13.18□□□□□ -0.3
SMAD3-210ENST00000559092 TMEM56-RWDD3S4R434 201 aa13.18□□□□□ -0.3
SMAD3-210ENST00000559092 A0A0G2JRQ6 117 aa13.17□□□□□ -0.3
SMAD3-210ENST00000559092 SPINK9Q5DT21 86 aa13.17□□□□□ -0.3
SMAD3-210ENST00000559092 Q6ZRM9 215 aa13.17□□□□□ -0.3
SMAD3-210ENST00000559092 SELENOHQ8IZQ5 122 aaKnown RBP13.17□□□□□ -0.3
SMAD3-210ENST00000559092 PINX1Q96BK5 328 aaKnown RBP13.17□□□□□ -0.3
SMAD3-210ENST00000559092 GALNT14Q96FL9 552 aa13.17□□□□□ -0.3
SMAD3-210ENST00000559092 HIPK2Q9H2X6 1198 aa13.17□□□□□ -0.3
SMAD3-210ENST00000559092 SMPXQ9UHP9 88 aa13.17□□□□□ -0.3
SMAD3-210ENST00000559092 SELENOKQ9Y6D0 94 aa13.17□□□□□ -0.3
SMAD3-210ENST00000559092 GNG7O60262 68 aa13.16□□□□□ -0.3
SMAD3-210ENST00000559092 YIF1AO95070 293 aa13.16□□□□□ -0.3
SMAD3-210ENST00000559092 LYL1P12980 280 aa13.16□□□□□ -0.3
SMAD3-210ENST00000559092 HOXA1P49639 335 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-210ENST00000559092 CASC10Q5T4H9 136 aa13.16□□□□□ -0.3
SMAD3-210ENST00000559092 LHFPL5Q8TAF8 219 aa13.16□□□□□ -0.3
SMAD3-210ENST00000559092 IL22RA2Q969J5 263 aa13.16□□□□□ -0.3
SMAD3-210ENST00000559092 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
SMAD3-210ENST00000559092 WFDC10AQ9H1F0 79 aa13.16□□□□□ -0.3
SMAD3-210ENST00000559092 RNASE2P10153 161 aaKnown RBP13.15□□□□□ -0.3
SMAD3-210ENST00000559092 AP3S2P59780 193 aa13.15□□□□□ -0.3
SMAD3-210ENST00000559092 BSXQ3C1V8 233 aa13.15□□□□□ -0.3
SMAD3-210ENST00000559092 FAM110AQ9BQ89 295 aa13.15□□□□□ -0.3
SMAD3-210ENST00000559092 MCUBQ9NWR8 336 aa13.15□□□□□ -0.3
SMAD3-210ENST00000559092 IGHV3OR16-8A0A075B7F1 116 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 TRAV14DV4A0A0A6YYC5 116 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 IGHV7-4-1A0A0J9YVY3 117 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 ZNF701M0R085 212 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-210ENST00000559092 ZNF207O43670 478 aaKnown RBP13.14□□□□□ -0.31
SMAD3-210ENST00000559092 IGHV3-48P01763 117 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 CD5P06127 495 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 S100A5P33763 92 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 FAUP35544 74 aaKnown RBP13.14□□□□□ -0.31
SMAD3-210ENST00000559092 HTR2BP41595 481 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 TMEM268Q5VZI3 342 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 TMEM116Q8NCL8 245 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 DEDD2Q8WXF8 326 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 GPR146Q96CH1 333 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 RHPN1-AS1Q9BWJ2 59 aa13.14□□□□□ -0.31
SMAD3-210ENST00000559092 LOC102724200A0A096LPH7 203 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms