RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ZNF562Q6V9R5 426 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 SLC16A13Q7RTY0 426 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 ABHD5Q8WTS1 349 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 MBD3L1Q8WWY6 194 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 ACTR3CQ9C0K3 210 aaPredicted RBP10.99□□□□□ -0.65
TPM1-215ENST00000558868 MEGF9Q9H1U4 602 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 RPRMQ9NS64 109 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 FAM96BQ9Y3D0 163 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 LSM4Q9Y4Z0 139 aaKnown RBP10.99□□□□□ -0.65
TPM1-215ENST00000558868 FCN1O00602 326 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 M6PRP20645 277 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 PEA15Q15121 130 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 OR10G4Q8NGN3 311 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 OR10G9Q8NGN4 311 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 OR10G7Q8NGN6 311 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 SFT2D1Q8WV19 159 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 SSMEM1Q8WWF3 244 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 C22orf15Q8WYQ4 148 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 MGST2Q99735 147 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 RASL11BQ9BPW5 248 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 SMDT1Q9H4I9 107 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 TREM1Q9NP99 234 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 SLC39A9Q9NUM3 307 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 F11RQ9Y624 299 aaKnown RBP10.98□□□□□ -0.65
TPM1-215ENST00000558868 TNCP24821 2201 aa10.98□□□□□ -0.65
TPM1-215ENST00000558868 NAV3Q8IVL0 2385 aa10.97□□□□□ -0.65
TPM1-215ENST00000558868 RNF223E7ERA6 249 aa10.97□□□□□ -0.65
TPM1-215ENST00000558868 PAX6P26367 422 aa10.97□□□□□ -0.65
TPM1-215ENST00000558868 RPL29P47914 159 aaKnown RBP10.97□□□□□ -0.65
TPM1-215ENST00000558868 GAMTQ14353 236 aa10.97□□□□□ -0.65
TPM1-215ENST00000558868 ACSM6Q6P461 480 aa10.97□□□□□ -0.65
TPM1-215ENST00000558868 BPIFCQ8NFQ6 507 aa10.97□□□□□ -0.65
TPM1-215ENST00000558868 ARPC1AQ92747 370 aa10.97□□□□□ -0.65
TPM1-215ENST00000558868 GGTLC1Q9BX51 225 aa10.97□□□□□ -0.65
TPM1-215ENST00000558868 WNK2Q9Y3S1 2297 aa10.97□□□□□ -0.65
TPM1-215ENST00000558868 CTXND1A0A1B0GTU2 59 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 AGPAT2O15120 278 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 HLA-DRB1P01911 266 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 REG1AP05451 166 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 FBP1P09467 338 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 AREGP15514 252 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 SSBP2P81877 361 aaPredicted RBP10.96□□□□□ -0.65
TPM1-215ENST00000558868 GUK1Q16774 197 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 FAM120AOSQ5T036 256 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 RUSC1-AS1Q66K80 236 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 SPSB3Q6PJ21 355 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 Q8N9W7 124 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 RCC1LQ96I51 464 aaKnown RBP10.96□□□□□ -0.65
TPM1-215ENST00000558868 NARS2Q96I59 477 aaKnown RBP10.96□□□□□ -0.65
TPM1-215ENST00000558868 VSIRQ9H7M9 311 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 PXMP4Q9Y6I8 212 aa10.96□□□□□ -0.65
TPM1-215ENST00000558868 SPG11Q96JI7 2443 aa10.96□□□□□ -0.66
TPM1-215ENST00000558868 PDZD2O15018 2839 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 IGHV3OR16-10A0A075B7F0 116 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 TMEM218A2RU14 115 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 MAP1LC3B2A6NCE7 125 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 TGFAP01135 160 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 IFNA1P01562 189 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 CD5P06127 495 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 IGHV4-38-2P0DP08 117 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 DEFA4P12838 97 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 CX3CL1P78423 397 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 MISP3Q96FF7 219 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 Q96MF0 132 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 MAP1LC3BQ9GZQ8 125 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 EIF5A2Q9GZV4 153 aaKnown RBP10.95□□□□□ -0.66
TPM1-215ENST00000558868 SLC45A2Q9UMX9 530 aa10.95□□□□□ -0.66
TPM1-215ENST00000558868 A0A0U1RQK1 487 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 A0A1W2PPV4 95 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 NPIPB5A8MRT5 1133 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 SEC14L6B5MCN3 397 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 CRYGCP07315 174 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 IGHV4-31P0DP07 118 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 CTRB1P17538 263 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 TAGLN2P37802 199 aaKnown RBP10.94□□□□□ -0.66
TPM1-215ENST00000558868 CDC34P49427 236 aaPredicted RBP10.94□□□□□ -0.66
TPM1-215ENST00000558868 B2MP61769 119 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 SELENOTP62341 195 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 PMS2P11Q13670 270 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 TMEM249Q2WGJ8 235 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 MIC13Q5XKP0 118 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 CTRB2Q6GPI1 263 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 FAM122CQ6P4D5 195 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 LCN15Q6UWW0 184 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 BRD3OSQ6XYD6 125 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
TPM1-215ENST00000558868 THAP8Q8NA92 274 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 ACY3Q96HD9 319 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 TMEM68Q96MH6 324 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 LINC00052Q96N35 136 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 RBM14Q96PK6 669 aaKnown RBP10.94□□□□□ -0.66
TPM1-215ENST00000558868 C19orf24Q9BVV8 132 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 WNT10AQ9GZT5 417 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 MOB4Q9Y3A3 225 aa10.94□□□□□ -0.66
TPM1-215ENST00000558868 MED13LQ71F56 2210 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 ABCA2Q9BZC7 2435 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 A0A1B0GV50 99 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 RBFOX3A6NFN3 312 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 OR10J1P30954 320 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 PPT1P50897 306 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms