RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 OR52I2Q8NH67 350 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 KIR2DL5BQ8NHK3 375 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 ZNF414Q96IQ9 312 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 TP53RKQ96S44 253 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 RNF2Q99496 336 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 RHPN1-AS1Q9BWJ2 59 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 NAA50Q9GZZ1 169 aaKnown RBP10.51□□□□□ -0.73
SNX6-210ENST00000557341 A0A0J9YWU9 116 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 CHEK1O14757 476 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 SPRY2O43597 315 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 IGKV1-5P01602 117 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 IGHV3-48P01763 117 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 CD3DP04234 171 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 ZNF182P17025 639 aaPredicted RBP10.5□□□□□ -0.73
SNX6-210ENST00000557341 CTF1Q16619 201 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 IZUMO4Q1ZYL8 232 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 SPINK9Q5DT21 86 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 LYG2Q86SG7 212 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 CCDC71LQ8N9Z2 235 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 C15orf40Q8WUR7 153 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 GALNT14Q96FL9 552 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 GINS3Q9BRX5 216 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 PDCD10Q9BUL8 212 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 C6orf62Q9GZU0 229 aaPredicted RBP10.5□□□□□ -0.73
SNX6-210ENST00000557341 MTFP1Q9UDX5 166 aa10.5□□□□□ -0.73
SNX6-210ENST00000557341 IGHV3-49A0A0A0MS15 119 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 TRAV14DV4A0A0A6YYC5 116 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 C3orf85A0A1B0GTC6 90 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 CXorf65A6NEN9 183 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 CORTO00230 105 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 P0C879 139 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 SMIM18P0DKX4 95 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 SNCAP37840 140 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 NPBWR1P48145 328 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 TNFRSF9Q07011 255 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 PMS2P11Q13670 270 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 TRIM16LQ309B1 348 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 COPZ2Q9P299 210 aa10.49□□□□□ -0.73
SNX6-210ENST00000557341 IGKV3-7A0A075B6H7 116 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 NUPR2A6NF83 97 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 INS-IGF2F8WCM5 200 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 ST8SIA3O43173 380 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 IFNA17P01571 189 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 RPL35AP18077 110 aaKnown RBP10.48□□□□□ -0.73
SNX6-210ENST00000557341 TFPI2P48307 235 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 HOXA1P49639 335 aaPredicted RBP10.48□□□□□ -0.73
SNX6-210ENST00000557341 CMC4P56277 68 aaPredicted RBP10.48□□□□□ -0.73
SNX6-210ENST00000557341 TAS2R19P59542 299 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 SCGB2B2Q4G0G5 96 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 GPR107Q5VW38 600 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 APRG1Q8IVJ8 170 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 DUSP18Q8NEJ0 188 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 OR4D10Q8NGI6 311 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 RNASE11Q8TAA1 199 aaKnown RBP10.48□□□□□ -0.73
SNX6-210ENST00000557341 ZFAND1Q8TCF1 268 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 RNF183Q96D59 192 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 MAP6D1Q9H9H5 199 aa10.48□□□□□ -0.73
SNX6-210ENST00000557341 B3GALNT1O75752 331 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 RAB3DO95716 219 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 CD74P04233 296 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 CD5P06127 495 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 SUB1P53999 127 aaKnown RBP eCLIP10.47□□□□□ -0.73
SNX6-210ENST00000557341 ZNF600Q6ZNG1 722 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 TMEM229BQ8NBD8 167 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 OR13C8Q8NGS7 320 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 TERB2Q8NHR7 220 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 RRNAD1Q96FB5 475 aaKnown RBP10.47□□□□□ -0.73
SNX6-210ENST00000557341 ABHD1Q96SE0 405 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 ENY2Q9NPA8 101 aa10.47□□□□□ -0.73
SNX6-210ENST00000557341 BIRC6Q9NR09 4857 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 IGHV3OR16-13A0A075B7E8 117 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 IGHV3-74A0A0B4J1X5 117 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 A0A0B4J293 547 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 GABARAPH6UMI1 98 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 RGS5O15539 181 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 ATF4P18848 351 aaPredicted RBP10.46□□□□□ -0.73
SNX6-210ENST00000557341 UCP1P25874 307 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 PAFAH1B2P68402 229 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 MRPS10P82664 201 aaKnown RBP10.46□□□□□ -0.73
SNX6-210ENST00000557341 EWSR1Q01844 656 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNX6-210ENST00000557341 SP6Q3SY56 376 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 FAM90A2PQ658T7 463 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 STEAP1BQ6NZ63 245 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 TOMM20LQ6UXN7 152 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 TCF24Q7RTU0 167 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 TMEM217Q8N7C4 229 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 MARCH1Q8TCQ1 289 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 LINC00476Q8WZB0 136 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 ZFAND3Q9H8U3 227 aa10.46□□□□□ -0.73
SNX6-210ENST00000557341 PUS1Q9Y606 427 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNX6-210ENST00000557341 SCGB2A1O75556 95 aa10.45□□□□□ -0.74
SNX6-210ENST00000557341 RNASE2P10153 161 aaKnown RBP10.45□□□□□ -0.74
SNX6-210ENST00000557341 OPRK1P41145 380 aa10.45□□□□□ -0.74
SNX6-210ENST00000557341 SSBP1Q04837 148 aaKnown RBP10.45□□□□□ -0.74
SNX6-210ENST00000557341 MEF2DQ14814 521 aa10.45□□□□□ -0.74
SNX6-210ENST00000557341 ZNF124Q15973 351 aa10.45□□□□□ -0.74
SNX6-210ENST00000557341 PVRIGQ6DKI7 326 aa10.45□□□□□ -0.74
SNX6-210ENST00000557341 GBGT1Q8N5D6 347 aa10.45□□□□□ -0.74
SNX6-210ENST00000557341 ST8SIA2Q92186 375 aa10.45□□□□□ -0.74
SNX6-210ENST00000557341 TMEM231Q9H6L2 316 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms