RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GNG7O60262 68 aa16.72■□□□□ 0.27
ACTN1-220ENST00000556433 TFPI2P48307 235 aa16.72■□□□□ 0.27
ACTN1-220ENST00000556433 RND3P61587 244 aa16.72■□□□□ 0.27
ACTN1-220ENST00000556433 TNFRSF9Q07011 255 aa16.72■□□□□ 0.27
ACTN1-220ENST00000556433 PMS2P11Q13670 270 aa16.72■□□□□ 0.27
ACTN1-220ENST00000556433 RNASE10Q5GAN6 216 aaKnown RBP16.72■□□□□ 0.27
ACTN1-220ENST00000556433 APRG1Q8IVJ8 170 aa16.72■□□□□ 0.27
ACTN1-220ENST00000556433 RNF183Q96D59 192 aa16.72■□□□□ 0.27
ACTN1-220ENST00000556433 ZNF486Q96H40 463 aaPredicted RBP16.72■□□□□ 0.27
ACTN1-220ENST00000556433 IGKV3-7A0A075B6H7 116 aa16.71■□□□□ 0.27
ACTN1-220ENST00000556433 IGKV1-5P01602 117 aa16.71■□□□□ 0.27
ACTN1-220ENST00000556433 CD3DP04234 171 aa16.71■□□□□ 0.27
ACTN1-220ENST00000556433 CMC4P56277 68 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-220ENST00000556433 PIGPP57054 158 aa16.71■□□□□ 0.27
ACTN1-220ENST00000556433 EWSR1Q01844 656 aaKnown RBP eCLIP16.71■□□□□ 0.271e-13■■■■■ 50.4
ACTN1-220ENST00000556433 LHFPL1Q86WI0 220 aa16.71■□□□□ 0.27
ACTN1-220ENST00000556433 OR52I2Q8NH67 350 aa16.71■□□□□ 0.27
ACTN1-220ENST00000556433 AP3S1Q92572 193 aa16.71■□□□□ 0.27
ACTN1-220ENST00000556433 C6orf62Q9GZU0 229 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-220ENST00000556433 MAP6D1Q9H9H5 199 aa16.71■□□□□ 0.27
ACTN1-220ENST00000556433 BIRC6Q9NR09 4857 aa16.7■□□□□ 0.26
ACTN1-220ENST00000556433 IGHV3OR16-13A0A075B7E8 117 aa16.7■□□□□ 0.26
ACTN1-220ENST00000556433 IGHV3-74A0A0B4J1X5 117 aa16.7■□□□□ 0.26
ACTN1-220ENST00000556433 ZNF182P17025 639 aaPredicted RBP16.7■□□□□ 0.26
ACTN1-220ENST00000556433 SNCAP37840 140 aa16.7■□□□□ 0.26
ACTN1-220ENST00000556433 DUSP18Q8NEJ0 188 aa16.7■□□□□ 0.26
ACTN1-220ENST00000556433 TP53RKQ96S44 253 aa16.7■□□□□ 0.26
ACTN1-220ENST00000556433 NAA50Q9GZZ1 169 aaKnown RBP16.7■□□□□ 0.26
ACTN1-220ENST00000556433 EXTL2Q9UBQ6 330 aa16.7■□□□□ 0.26
ACTN1-220ENST00000556433 ALMS1Q8TCU4 4167 aa16.7■□□□□ 0.26
ACTN1-220ENST00000556433 A0A0B4J293 547 aa16.69■□□□□ 0.26
ACTN1-220ENST00000556433 IFNA17P01571 189 aa16.69■□□□□ 0.26
ACTN1-220ENST00000556433 NPBWR1P48145 328 aa16.69■□□□□ 0.26
ACTN1-220ENST00000556433 TOMM20LQ6UXN7 152 aa16.69■□□□□ 0.26
ACTN1-220ENST00000556433 GBGT1Q8N5D6 347 aa16.69■□□□□ 0.26
ACTN1-220ENST00000556433 ARRDC1Q8N5I2 433 aa16.69■□□□□ 0.26
ACTN1-220ENST00000556433 MTFP1Q9UDX5 166 aa16.69■□□□□ 0.26
ACTN1-220ENST00000556433 C3orf85A0A1B0GTC6 90 aa16.68■□□□□ 0.26
ACTN1-220ENST00000556433 ATG12O94817 140 aa16.68■□□□□ 0.26
ACTN1-220ENST00000556433 AKR1C2P52895 323 aa16.68■□□□□ 0.26
ACTN1-220ENST00000556433 ZNF124Q15973 351 aa16.68■□□□□ 0.26
ACTN1-220ENST00000556433 CTF1Q16619 201 aa16.68■□□□□ 0.26
ACTN1-220ENST00000556433 FAM90A2PQ658T7 463 aa16.68■□□□□ 0.26
ACTN1-220ENST00000556433 SLC35G3Q8N808 338 aa16.68■□□□□ 0.26
ACTN1-220ENST00000556433 ABHD1Q96SE0 405 aa16.68■□□□□ 0.26
ACTN1-220ENST00000556433 GINS3Q9BRX5 216 aa16.68■□□□□ 0.26
ACTN1-220ENST00000556433 ST8SIA3O43173 380 aa16.67■□□□□ 0.26
ACTN1-220ENST00000556433 P0C879 139 aa16.67■□□□□ 0.26
ACTN1-220ENST00000556433 TBPP20226 339 aa16.67■□□□□ 0.26
ACTN1-220ENST00000556433 PPP5CP53041 499 aa16.67■□□□□ 0.26
ACTN1-220ENST00000556433 PAFAH1B2P68402 229 aa16.67■□□□□ 0.26
ACTN1-220ENST00000556433 TRIM16LQ309B1 348 aa16.67■□□□□ 0.26
ACTN1-220ENST00000556433 SP6Q3SY56 376 aa16.67■□□□□ 0.26
ACTN1-220ENST00000556433 PDCD10Q9BUL8 212 aa16.67■□□□□ 0.26
ACTN1-220ENST00000556433 COPZ2Q9P299 210 aa16.67■□□□□ 0.26
ACTN1-220ENST00000556433 NUPR2A6NF83 97 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 INS-IGF2F8WCM5 200 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 GABARAPO95166 117 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 ETV6P41212 452 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 CEMP1Q6PRD7 247 aaPredicted RBP16.66■□□□□ 0.26
ACTN1-220ENST00000556433 TCF24Q7RTU0 167 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 OR4D10Q8NGI6 311 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 TERB2Q8NHR7 220 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 ZFAND1Q8TCF1 268 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 C15orf40Q8WUR7 153 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 LINC00476Q8WZB0 136 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 CSTL1Q9H114 145 aa16.66■□□□□ 0.26
ACTN1-220ENST00000556433 MPTX1A8MV57 137 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 TMEM50AO95807 157 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 ATF4P18848 351 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-220ENST00000556433 SUB1P53999 127 aaKnown RBP eCLIP16.65■□□□□ 0.26
ACTN1-220ENST00000556433 SCGB2B2Q4G0G5 96 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 GPR107Q5VW38 600 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 ZNF600Q6ZNG1 722 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 LILRB2Q8N423 598 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 TMEM217Q8N7C4 229 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 CCDC71LQ8N9Z2 235 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 TMEM229BQ8NBD8 167 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 ST8SIA2Q92186 375 aa16.65■□□□□ 0.26
ACTN1-220ENST00000556433 PUS1Q9Y606 427 aaKnown RBP eCLIP16.65■□□□□ 0.26
ACTN1-220ENST00000556433 LY6G6CO95867 125 aa16.64■□□□□ 0.25
ACTN1-220ENST00000556433 APOHP02749 345 aaPredicted RBP16.64■□□□□ 0.25
ACTN1-220ENST00000556433 CD5P06127 495 aa16.64■□□□□ 0.25
ACTN1-220ENST00000556433 TAS2R19P59542 299 aa16.64■□□□□ 0.25
ACTN1-220ENST00000556433 PVRIGQ6DKI7 326 aa16.64■□□□□ 0.25
ACTN1-220ENST00000556433 OR13C8Q8NGS7 320 aa16.64■□□□□ 0.25
ACTN1-220ENST00000556433 RRNAD1Q96FB5 475 aaKnown RBP16.64■□□□□ 0.25
ACTN1-220ENST00000556433 VSIRQ9H7M9 311 aa16.64■□□□□ 0.25
ACTN1-220ENST00000556433 ENY2Q9NPA8 101 aa16.64■□□□□ 0.25
ACTN1-220ENST00000556433 IGHV3-66A0A0C4DH42 116 aa16.63■□□□□ 0.25
ACTN1-220ENST00000556433 DNASE2O00115 360 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-220ENST00000556433 CORTO00230 105 aa16.63■□□□□ 0.25
ACTN1-220ENST00000556433 RAB3DO95716 219 aa16.63■□□□□ 0.25
ACTN1-220ENST00000556433 CD74P04233 296 aa16.63■□□□□ 0.25
ACTN1-220ENST00000556433 SMIM18P0DKX4 95 aa16.63■□□□□ 0.25
ACTN1-220ENST00000556433 RNASE2P10153 161 aaKnown RBP16.63■□□□□ 0.25
ACTN1-220ENST00000556433 HOXA1P49639 335 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-220ENST00000556433 RNASE11Q8TAA1 199 aaKnown RBP16.63■□□□□ 0.25
ACTN1-220ENST00000556433 MARCH1Q8TCQ1 289 aa16.63■□□□□ 0.25
ACTN1-220ENST00000556433 DFFBO76075 338 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms