RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 SDC4P31431 198 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 PHBP35232 272 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 CDC34P49427 236 aaPredicted RBP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 NKX2-5P52952 324 aaPredicted RBP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 MYL6P60660 151 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 SPCS3P61009 180 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 POLR2GP62487 172 aaKnown RBP eCLIP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 CCL7P80098 99 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 AKR1C1Q04828 323 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 SRSF6Q13247 344 aaKnown RBP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 EDDM3AQ14507 147 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 HIST3H3Q16695 136 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 LIN52Q52LA3 116 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 BRMS1LQ5PSV4 323 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 CLVS2Q5SYC1 327 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 TNFAIP8L2Q6P589 184 aaPredicted RBP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 DNM1P34Q6PK57 102 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 FUNDC1Q8IVP5 155 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 GID4Q8IVV7 300 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 UMODL1-AS1Q8N2C9 162 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 STX19Q8N4C7 294 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 RPP25LQ8N5L8 163 aaKnown RBP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 C12orf29Q8N999 325 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 OR51D1Q8NGF3 324 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 MCFD2Q8NI22 146 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 GRPEL2Q8TAA5 225 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 MAGOHBQ96A72 148 aaKnown RBP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 IMP4Q96G21 291 aaKnown RBP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 DCUN1D1Q96GG9 259 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 GPER1Q99527 375 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 PRRT1Q99946 306 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 CMSS1Q9BQ75 279 aaKnown RBP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 PDCD10Q9BUL8 212 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 DDA1Q9BW61 102 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM96AQ9H5X1 160 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 BIN3Q9NQY0 253 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 CMTM6Q9NX76 183 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 GSKIPQ9P0R6 139 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 LAMTOR3Q9UHA4 124 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 COQ4Q9Y3A0 265 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 TIMM22Q9Y584 194 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 NAIPQ13075 1403 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 PPIP5K1Q6PFW1 1433 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 YTHDC2Q9H6S0 1430 aaKnown RBP0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 CNTLNQ9NXG0 1405 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 NCOA3Q9Y6Q9 1424 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 MRC2Q9UBG0 1479 aa0.61□□□□□ -2.31
SUPT16H-206ENST00000556309 NUP155O75694 1391 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 BORCS7-ASMTA0A0B4J1R7 106 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 IGKV1-9A0A0C4DH69 117 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PVALEFA0A1B0GWK0 134 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PPP5D1E7EU14 171 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 J3QR89 54 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 J3QRK9 145 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 K7ERU9 68 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 M0QZ92 97 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 SLC22A1O15245 554 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 GGCTO75223 188 aaKnown RBP0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PIAS1O75925 651 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 ATG12O94817 140 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 APOMO95445 188 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 IFNA10P01566 189 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 S100A8P05109 93 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 CTXN2P0C2S0 81 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 OR10J4P0C629 311 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 UBBP0CG47 229 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 SMIM6P0DI80 62 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 C8orf88P0DMB2 117 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 SULT1A3P0DMM9 295 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 SULT1A4P0DMN0 295 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 CD79AP11912 226 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 HIST1H1TP22492 207 aaPredicted RBP0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 S100PP25815 95 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 S100GP29377 79 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 DDTP30046 118 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 CMPK1P30085 196 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PPP1R2P41236 205 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 MAP2K4P45985 399 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 UBE2G2P60604 165 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 CDC42P60953 191 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 CXCR4P61073 352 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PSME3P61289 254 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 HIST1H3AP68431 136 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 H3F3AP84243 136 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 SCGB2B2Q4G0G5 96 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 TMEM97Q5BJF2 176 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 CDKL4Q5MAI5 379 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 CST9Q5W186 159 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 RPL13AP3Q6NVV1 102 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PPP1R2P3Q6NXS1 205 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 CD200R1LQ6Q8B3 271 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 SBSNQ6UWP8 590 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 TOMM20LQ6UXN7 152 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 IDO2Q6ZQW0 420 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 HIST2H3AQ71DI3 136 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM19A5Q7Z5A7 132 aaPredicted RBP0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 DHFR2Q86XF0 187 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 OR6V1Q8N148 313 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 DYNAPQ8N1N2 210 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 TMEM251Q8N6I4 163 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms