RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 RCC1LQ96I51 464 aaKnown RBP7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 GGTLC1Q9BX51 225 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 LPAR2Q9HBW0 351 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 C17orf112F2Z3M2 114 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 NPFFO15130 113 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 SOX15O60248 233 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 HBE1P02100 147 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 MBP02144 154 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 OR13C7P0DN81 318 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 SLC25A16P16260 332 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 MFAP2P55001 183 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 ELLP55199 621 aaPredicted RBP7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 LGALS4P56470 323 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 PMS2P11Q13670 270 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 GAMTQ14353 236 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 HNF4GQ14541 408 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 CLEC12BQ2HXU8 276 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 FFAR4Q5NUL3 377 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 FAM120AOSQ5T036 256 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 TMEM144Q7Z5S9 345 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 RNASEH2CQ8TDP1 164 aaKnown RBP7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 SFT2D1Q8WV19 159 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 CACNG8Q8WXS5 425 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 FNDC4Q9H6D8 234 aaPredicted RBP7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 TREM1Q9NP99 234 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 KIAA1456Q9P272 454 aa7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 CARHSP1Q9Y2V2 147 aaKnown RBP7.54□□□□□ -1.2
HNRNPC-223ENST00000556142 NSD1Q96L73 2696 aaPredicted RBP7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 IGKV1OR2-108A0A075B7D4 117 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 SMCO3A2RU48 225 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 SEC14L6B5MCN3 397 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 CRYGCP07315 174 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 LINC00869P0C866 280 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 AREGP15514 252 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 M6PRP20645 277 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 SAA4P35542 130 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 RPL29P47914 159 aaKnown RBP7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 MMDQ15546 238 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 C5orf64Q2M2E5 130 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 MIC13Q5XKP0 118 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 TEPPQ6URK8 271 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 CCDC28AQ8IWP9 274 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 OR10G4Q8NGN3 311 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 OR10G9Q8NGN4 311 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 OR10G7Q8NGN6 311 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 SRSF12Q8WXF0 261 aaKnown RBP7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 RARRES2Q99969 163 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 SRSF8Q9BRL6 282 aaKnown RBP7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 SLC45A2Q9UMX9 530 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 DMRT1Q9Y5R6 373 aa7.53□□□□□ -1.2
HNRNPC-223ENST00000556142 FBN1P35555 2871 aaKnown RBP7.52□□□□□ -1.2
HNRNPC-223ENST00000556142 CTXND1A0A1B0GTU2 59 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 A0A1B0GV50 99 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 RBFOX3A6NFN3 312 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 EIF3GO75821 320 aaKnown RBP eCLIP7.52□□□□□ -1.214e-12■■■□□ 16.7
HNRNPC-223ENST00000556142 SCO1O75880 301 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 REG1AP05451 166 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 MSMBP08118 114 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 SUB1P53999 127 aaKnown RBP eCLIP7.52□□□□□ -1.211e-7■■■■■ 43.5
HNRNPC-223ENST00000556142 PEA15Q15121 130 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 ACOT6Q3I5F7 207 aaPredicted RBP7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 GCSAMLQ5JQS6 135 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 ZNF506Q5JVG8 444 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 RUSC1-AS1Q66K80 236 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 ATRAIDQ6UW56 229 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 LCN15Q6UWW0 184 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 LRRC75A-AS1Q8N1F1 130 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 ZNF709Q8N972 641 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 OR2T6Q8NHC8 308 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 SEC11CQ9BY50 192 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 SMDT1Q9H4I9 107 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 BEX4Q9NWD9 120 aaPredicted RBP7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 MRPL36Q9P0J6 103 aaKnown RBP7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 PXMP4Q9Y6I8 212 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 VPS13CQ709C8 3753 aa7.52□□□□□ -1.21
HNRNPC-223ENST00000556142 IGKV1D-37A0A075B6S9 117 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 IGHV1-69DA0A0B4J2H0 117 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 IGHV1-69P01742 117 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 ICAM4Q14773 271 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 TMEM249Q2WGJ8 235 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 ASPHD1Q5U4P2 390 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 C19orf35Q6ZS72 473 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 SLC16A13Q7RTY0 426 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 Q8N9W7 124 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 THAP8Q8NA92 274 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 WFDC11Q8NEX6 87 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 OR1P1Q8NH06 330 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 PIFOQ8TCI5 191 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 RAB24Q969Q5 203 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 MBD6Q96DN6 1003 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 PBDC1Q9BVG4 233 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 ACTR3CQ9C0K3 210 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 MEGF9Q9H1U4 602 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 SLC39A9Q9NUM3 307 aa7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 F11RQ9Y624 299 aaKnown RBP7.51□□□□□ -1.21
HNRNPC-223ENST00000556142 LOC102723971A0A1B0GUV8 181 aa7.5□□□□□ -1.21
HNRNPC-223ENST00000556142 MAP1LC3B2A6NCE7 125 aa7.5□□□□□ -1.21
HNRNPC-223ENST00000556142 B4DSR2 109 aa7.5□□□□□ -1.21
HNRNPC-223ENST00000556142 F8W036 122 aa7.5□□□□□ -1.21
HNRNPC-223ENST00000556142 CYB5BO43169 146 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms