RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 OCIAD2Q56VL3 154 aa14.68□□□□□ -0.06
SYNE3-204ENST00000555759 ZNF497Q6ZNH5 498 aa14.68□□□□□ -0.06
SYNE3-204ENST00000555759 TFF2Q03403 129 aa14.68□□□□□ -0.06
SYNE3-204ENST00000555759 SHISA5Q8N114 240 aa14.68□□□□□ -0.06
SYNE3-204ENST00000555759 SEC16AO15027 2179 aa14.68□□□□□ -0.06
SYNE3-204ENST00000555759 OR10W1Q8NGF6 305 aa14.68□□□□□ -0.06
SYNE3-204ENST00000555759 DEPPQ9NTK1 212 aa14.68□□□□□ -0.06
SYNE3-204ENST00000555759 TRAV8-4A0A0B4J246 113 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 UPK2O00526 184 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 TMEM14EPQ6UXP3 125 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 FAM90A27PA6NNH2 459 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 C9JQL5 133 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 YPEL1O60688 119 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 SLC25A48Q6ZT89 311 aaKnown RBP14.67□□□□□ -0.06
SYNE3-204ENST00000555759 DEFB123Q8N688 67 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 YPEL2Q96QA6 119 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 CHCHD2Q9Y6H1 151 aaPredicted RBP14.67□□□□□ -0.06
SYNE3-204ENST00000555759 NPPCP23582 126 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 ASIPP42127 132 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 GATA2P23769 480 aaPredicted RBP14.67□□□□□ -0.06
SYNE3-204ENST00000555759 FADS6Q8N9I5 356 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 MRAP2Q96G30 205 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 MESP1Q9BRJ9 268 aa14.67□□□□□ -0.06
SYNE3-204ENST00000555759 UBE2L6O14933 153 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 KBTBD11-OT1A0A1B0GTJ5 212 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 H7C1H1 209 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 SRSF1Q07955 248 aaKnown RBP eCLIP14.66□□□□□ -0.06
SYNE3-204ENST00000555759 SPSB3Q6PJ21 355 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 TREML4Q6UXN2 200 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 CLEC7AQ9BXN2 247 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 CST9LQ9H4G1 147 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 PILRBQ9UKJ0 227 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 ZNF56Q15929 161 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 CRIM1Q9NZV1 1036 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 LINC01549A6NIU2 74 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 TMEM171Q8WVE6 324 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 GGTLC1Q9BX51 225 aa14.66□□□□□ -0.06
SYNE3-204ENST00000555759 CDX4O14627 284 aaPredicted RBP14.65□□□□□ -0.06
SYNE3-204ENST00000555759 KLK10O43240 276 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 SYS1-DBNDD2H3BUS1 97 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 FAM159AQ6UWV7 190 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 DNASE2BQ8WZ79 361 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 ZNF319Q9P2F9 582 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 TCRBV4S1A1TA0A5B7 111 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 GNG5P63218 68 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 RSPO4Q2I0M5 234 aaPredicted RBP14.65□□□□□ -0.06
SYNE3-204ENST00000555759 RP1P56715 2156 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 QRFPP83859 136 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 SCN8AQ9UQD0 1980 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 PLXNB2O15031 1838 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 ZNF831Q5JPB2 1677 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 E9PQ18 207 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 PFN1P07737 140 aaKnown RBP14.65□□□□□ -0.06
SYNE3-204ENST00000555759 CD69Q07108 199 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 WBP1Q96G27 269 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 GTSF1LQ9H1H1 148 aa14.65□□□□□ -0.06
SYNE3-204ENST00000555759 BCL6BQ8N143 479 aaPredicted RBP14.64□□□□□ -0.07
SYNE3-204ENST00000555759 ZNRF1Q8ND25 227 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 ASCL2Q99929 193 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 FABP5P3A8MUU1 101 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 RAMP3O60896 148 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 ORMDL2Q53FV1 153 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 A0A0G2JMM0 328 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 A0A1W2PPB8 328 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 KIR3DP1A8MWS1 328 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 GUSBP1Q15486 140 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 MOB4Q9Y3A3 225 aa14.64□□□□□ -0.07
SYNE3-204ENST00000555759 A0A1B0GWJ7 208 aa14.63□□□□□ -0.07
SYNE3-204ENST00000555759 PRCDQ00LT1 54 aa14.63□□□□□ -0.07
SYNE3-204ENST00000555759 EEF1AKMT3Q96AZ1 226 aa14.63□□□□□ -0.07
SYNE3-204ENST00000555759 H3BRM9 83 aa14.63□□□□□ -0.07
SYNE3-204ENST00000555759 LCN12Q6JVE5 192 aa14.63□□□□□ -0.07
SYNE3-204ENST00000555759 RPRMLQ8N4K4 120 aa14.63□□□□□ -0.07
SYNE3-204ENST00000555759 CRISPLD2Q9H0B8 497 aa14.63□□□□□ -0.07
SYNE3-204ENST00000555759 TDGF1P13385 188 aa14.63□□□□□ -0.07
SYNE3-204ENST00000555759 A0A087X0K7 114 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 MUC21A0A0G2JKD1 596 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 MUC21A0A140T8X8 626 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 IQCF6A8MYZ5 107 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 TGFAP01135 160 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 NPSP0C0P6 89 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 MUC21Q5SSG8 566 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 SIGLEC12Q96PQ1 595 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 IGLV3-32A0A0A0MS00 114 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 KIR3DS1Q14943 382 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 hDV102S1A0JD36 115 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 VKORC1Q9BQB6 163 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 M0R381 172 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 MMP23AO75900 390 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 LRRC37AA6NMS7 1700 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 UBR3Q6ZT12 1888 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 TMEM95Q3KNT9 176 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 Q6ZT83 130 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 PSG8Q9UQ74 426 aa14.62□□□□□ -0.07
SYNE3-204ENST00000555759 KIAA0100Q14667 2235 aaKnown RBP14.62□□□□□ -0.07
SYNE3-204ENST00000555759 A0A0G2JMZ2 1700 aa14.61□□□□□ -0.07
SYNE3-204ENST00000555759 LRRC37A2A6NM11 1700 aa14.61□□□□□ -0.07
SYNE3-204ENST00000555759 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.61□□□□□ -0.07
SYNE3-204ENST00000555759 RALGAPA2Q2PPJ7 1873 aa14.61□□□□□ -0.07
SYNE3-204ENST00000555759 FAM74A4Q5TZK3 123 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms