RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 PDE4DIPQ5VU43 2346 aa3□□□□□ -1.93
USP44-208ENST00000552440 ADAMTSL1Q8N6G6 1762 aa3□□□□□ -1.93
USP44-208ENST00000552440 CRB1P82279 1406 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 GON4LQ3T8J9 2241 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 EPM2AB3EWF7 344 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 INS-IGF2F8WCM5 200 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 J3QQQ9 107 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 J3QR89 54 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 ZNF432O94892 652 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 GAS8-AS1O95177 125 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 IGHV3-11P01762 117 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 HLA-DQB1P01920 261 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 AMBPP02760 352 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 INAFM2P0DMQ5 153 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 EIF3IQ13347 325 aaKnown RBP2.99□□□□□ -1.93
USP44-208ENST00000552440 PDGFRLQ15198 375 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 RTL8BQ17RB0 113 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 ZNF695Q8IW36 515 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 LYG1Q8N1E2 194 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 TMEM106AQ96A25 262 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 TOMM6Q96B49 74 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 SLAMF6Q96DU3 332 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 DERL3Q96Q80 235 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 PEBP4Q96S96 227 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 ZNF471Q9BX82 626 aaPredicted RBP2.99□□□□□ -1.93
USP44-208ENST00000552440 FGFBP2Q9BYJ0 223 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 CST9LQ9H4G1 147 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 ZFP30Q9Y2G7 519 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 ABCA3Q99758 1704 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 PARP4Q9UKK3 1724 aaKnown RBP2.99□□□□□ -1.93
USP44-208ENST00000552440 PAPPAQ13219 1627 aa2.99□□□□□ -1.93
USP44-208ENST00000552440 ZNF106Q9H2Y7 1883 aaKnown RBP2.98□□□□□ -1.93
USP44-208ENST00000552440 IGHV3-72A0A0B4J1Y9 119 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 TRAV38-1A0A0B4J264 116 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 IGHV1OR15-9A0A0B4J2B8 117 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 GABARAPH6UMI1 98 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 LY6G6DO95868 133 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 IGKV1-39P01597 117 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 IGKV1D-39P04432 117 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 ZNF705DP0CH99 300 aaPredicted RBP2.98□□□□□ -1.93
USP44-208ENST00000552440 P0DMU3 169 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 FAM231AP0DMU4 169 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 FAM231CP0DMU5 169 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 ZNF823P16415 610 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 CRISP2P16562 243 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 FGF7P21781 194 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 CGB2Q6NT52 195 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 ZNF709Q8N972 641 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 TEX37Q96LM6 180 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 TAF9BQ9HBM6 251 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 NAT8Q9UHE5 227 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 MCTS1Q9ULC4 181 aaKnown RBP2.98□□□□□ -1.93
USP44-208ENST00000552440 CICQ96RK0 1608 aaPredicted RBP2.98□□□□□ -1.93
USP44-208ENST00000552440 ZNF609O15014 1411 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 ANKRD50Q9ULJ7 1429 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 SBF2Q86WG5 1849 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 KIF13BQ9NQT8 1826 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 TCF20Q9UGU0 1960 aaKnown RBP2.98□□□□□ -1.93
USP44-208ENST00000552440 UQCRHLA0A096LP55 91 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 TRAV41A0A0B4J266 112 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 IGKV1-6A0A0C4DH72 117 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 PGLYRP1O75594 196 aaPredicted RBP2.98□□□□□ -1.93
USP44-208ENST00000552440 IFNA17P01571 189 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 IGLV1-44P01699 117 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 TRGC2P03986 189 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 UQCRHP07919 91 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 CSRP1P21291 193 aaKnown RBP2.98□□□□□ -1.93
USP44-208ENST00000552440 COPZ1P61923 177 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 PKIAP61925 76 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 ATP5G2Q06055 141 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 GPHB5Q86YW7 130 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 TCTEX1D1Q8N7M0 179 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 C15orf40Q8WUR7 153 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 AP1S3Q96PC3 154 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 LITAFQ99732 161 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 RNF122Q9H9V4 155 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 ZNF581Q9P0T4 197 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 ANKARQ7Z5J8 1434 aa2.98□□□□□ -1.93
USP44-208ENST00000552440 DOCK6Q96HP0 2047 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 LOC107984640A0A0U1RRK4 108 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 IZUMO1RA6ND01 250 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 IGLL5B9A064 214 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 UBE2L6O14933 153 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 PLA2G10O15496 165 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 MAS1P04201 325 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 LINC00694P0DN24 101 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 CXCL5P42830 114 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 DAPK1P53355 1430 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 ZNF181Q2M3W8 571 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 CCSMST1Q4G0I0 132 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 C8orf59Q8N0T1 100 aaPredicted RBP2.97□□□□□ -1.93
USP44-208ENST00000552440 ORMDL3Q8N138 153 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 ACBD7Q8N6N7 88 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 C20orf203Q8NBC4 194 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 OR8A1Q8NGG7 326 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 TERB2Q8NHR7 220 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 C2orf15Q8WU43 125 aaKnown RBP2.97□□□□□ -1.93
USP44-208ENST00000552440 HIST1H2BAQ96A08 127 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 NRTNQ99748 197 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms