RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 RNASE2P10153 161 aaKnown RBP16.61■□□□□ 0.25
NEK3-202ENST00000550841 IFNA10P01566 189 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 MFAP2P55001 183 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 EXOSC2Q13868 293 aaKnown RBP16.6■□□□□ 0.25
NEK3-202ENST00000550841 BSXQ3C1V8 233 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 C2orf83Q53S99 150 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 SLC24A4Q8NFF2 622 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 OR11H1Q8NG94 326 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 OR1N2Q8NGR9 330 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 MISP3Q96FF7 219 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 RANGRFQ9HD47 186 aaPredicted RBP16.6■□□□□ 0.25
NEK3-202ENST00000550841 PEF1Q9UBV8 284 aaKnown RBP16.6■□□□□ 0.25
NEK3-202ENST00000550841 DMRT1Q9Y5R6 373 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 ALG5Q9Y673 324 aa16.6■□□□□ 0.25
NEK3-202ENST00000550841 CYCSP99999 105 aaKnown RBP16.59■□□□□ 0.25
NEK3-202ENST00000550841 PVRIGQ6DKI7 326 aa16.59■□□□□ 0.25
NEK3-202ENST00000550841 MAGT1Q9H0U3 335 aa16.59■□□□□ 0.25
NEK3-202ENST00000550841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.58■□□□□ 0.24
NEK3-202ENST00000550841 GOSR2O14653 212 aa16.58■□□□□ 0.24
NEK3-202ENST00000550841 SCGB1D2O95969 90 aa16.58■□□□□ 0.24
NEK3-202ENST00000550841 NPY1RP25929 384 aa16.58■□□□□ 0.24
NEK3-202ENST00000550841 DEFA5Q01523 94 aa16.58■□□□□ 0.24
NEK3-202ENST00000550841 ZNF616Q08AN1 781 aa16.58■□□□□ 0.24
NEK3-202ENST00000550841 PRR31Q5SQ13 230 aa16.58■□□□□ 0.24
NEK3-202ENST00000550841 RAX2Q96IS3 184 aa16.58■□□□□ 0.24
NEK3-202ENST00000550841 ATP6V0BQ99437 205 aa16.58■□□□□ 0.24
NEK3-202ENST00000550841 ANKRD34BA5PLL1 514 aa16.57■□□□□ 0.24
NEK3-202ENST00000550841 LINC01619G3V211 115 aa16.57■□□□□ 0.24
NEK3-202ENST00000550841 TSPAN15O95858 294 aa16.57■□□□□ 0.24
NEK3-202ENST00000550841 OR8U8P0C7N1 319 aa16.57■□□□□ 0.24
NEK3-202ENST00000550841 POLR2GP62487 172 aaKnown RBP eCLIP16.57■□□□□ 0.24
NEK3-202ENST00000550841 RAB11AP62491 216 aa16.57■□□□□ 0.24
NEK3-202ENST00000550841 RNASEH2CQ8TDP1 164 aaKnown RBP16.57■□□□□ 0.24
NEK3-202ENST00000550841 RAB40CQ96S21 281 aa16.57■□□□□ 0.24
NEK3-202ENST00000550841 GAR1Q9NY12 217 aaKnown RBP16.57■□□□□ 0.24
NEK3-202ENST00000550841 RPS10-NUDT3A0A1W2PQS6 291 aa16.56■□□□□ 0.24
NEK3-202ENST00000550841 IAPPP10997 89 aa16.56■□□□□ 0.24
NEK3-202ENST00000550841 ZP3P21754 424 aa16.56■□□□□ 0.24
NEK3-202ENST00000550841 DEFB136Q30KP8 78 aa16.56■□□□□ 0.24
NEK3-202ENST00000550841 SCARB1Q8WTV0 552 aa16.56■□□□□ 0.24
NEK3-202ENST00000550841 PINX1Q96BK5 328 aaKnown RBP16.56■□□□□ 0.24
NEK3-202ENST00000550841 SMIM8Q96KF7 97 aa16.56■□□□□ 0.24
NEK3-202ENST00000550841 TXN2Q99757 166 aa16.56■□□□□ 0.24
NEK3-202ENST00000550841 MED28Q9H204 178 aa16.56■□□□□ 0.24
NEK3-202ENST00000550841 C21orf62Q9NYP8 219 aa16.56■□□□□ 0.24
NEK3-202ENST00000550841 I3L2K1 104 aa16.55■□□□□ 0.24
NEK3-202ENST00000550841 K7EIM0 57 aa16.55■□□□□ 0.24
NEK3-202ENST00000550841 MT-CO2P00403 227 aa16.55■□□□□ 0.24
NEK3-202ENST00000550841 MBPP02686 304 aaPredicted RBP16.55■□□□□ 0.24
NEK3-202ENST00000550841 MFAP4P55083 255 aa16.55■□□□□ 0.24
NEK3-202ENST00000550841 TAS2R30P59541 319 aa16.55■□□□□ 0.24
NEK3-202ENST00000550841 ETFRF1Q6IPR1 90 aa16.55■□□□□ 0.24
NEK3-202ENST00000550841 ZNF502Q8TBZ5 544 aa16.55■□□□□ 0.24
NEK3-202ENST00000550841 NMES1Q9C002 83 aa16.55■□□□□ 0.24
NEK3-202ENST00000550841 MFSD2BA6NFX1 497 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 SSSCA1O60232 199 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 IFNA4P05014 189 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 CLEC3BP05452 202 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 FHL3Q13643 280 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 CLEC19AQ6UXS0 136 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 ETV3LQ6ZN32 361 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 DUX3Q96PT4 197 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 PSENENQ9NZ42 101 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 MGAT4CQ9UBM8 478 aa16.54■□□□□ 0.24
NEK3-202ENST00000550841 STRAPQ9Y3F4 350 aaKnown RBP16.54■□□□□ 0.24
NEK3-202ENST00000550841 IGHV4OR15-8A0A075B7B6 117 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 A0A087WW49 117 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 L7N2F9 121 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 SIX6O95475 246 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 IGHV3-23P01764 117 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 PVALBP20472 110 aaPredicted RBP16.53■□□□□ 0.24
NEK3-202ENST00000550841 OPRK1P41145 380 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 VAMP2P63027 116 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 IL15RAQ13261 267 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 SPANXN5Q5MJ07 72 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 S4R3C0 116 aa16.53■□□□□ 0.24
NEK3-202ENST00000550841 IGHV3-21A0A0B4J1V1 117 aa16.52■□□□□ 0.24
NEK3-202ENST00000550841 GGCTO75223 188 aaKnown RBP16.52■□□□□ 0.24
NEK3-202ENST00000550841 RLN2P04090 185 aa16.52■□□□□ 0.24
NEK3-202ENST00000550841 FCGR2BP31994 310 aaPredicted RBP16.52■□□□□ 0.24
NEK3-202ENST00000550841 NPBWR1P48145 328 aa16.52■□□□□ 0.24
NEK3-202ENST00000550841 RPEL1Q2QD12 228 aa16.52■□□□□ 0.24
NEK3-202ENST00000550841 Q56UQ5 140 aa16.52■□□□□ 0.24
NEK3-202ENST00000550841 SPSB3Q6PJ21 355 aa16.52■□□□□ 0.24
NEK3-202ENST00000550841 TREML4Q6UXN2 200 aa16.52■□□□□ 0.24
NEK3-202ENST00000550841 WFDC9Q8NEX5 89 aa16.52■□□□□ 0.24
NEK3-202ENST00000550841 CCDC140Q96MF4 163 aa16.52■□□□□ 0.24
NEK3-202ENST00000550841 PAIP2BQ9ULR5 123 aaKnown RBP16.52■□□□□ 0.24
NEK3-202ENST00000550841 LSM5Q9Y4Y9 91 aaKnown RBP16.52■□□□□ 0.24
NEK3-202ENST00000550841 K7EPK0 472 aa16.51■□□□□ 0.23
NEK3-202ENST00000550841 TSC22D2O75157 780 aa16.51■□□□□ 0.23
NEK3-202ENST00000550841 SCGB2A1O75556 95 aa16.51■□□□□ 0.23
NEK3-202ENST00000550841 SLC25A4P12235 298 aa16.51■□□□□ 0.23
NEK3-202ENST00000550841 CD33P20138 364 aa16.51■□□□□ 0.23
NEK3-202ENST00000550841 ARL3P36405 182 aa16.51■□□□□ 0.23
NEK3-202ENST00000550841 GPX4P36969 197 aaPredicted RBP16.51■□□□□ 0.23
NEK3-202ENST00000550841 C11orf87Q6NUJ2 197 aa16.51■□□□□ 0.23
NEK3-202ENST00000550841 ACSM6Q6P461 480 aa16.51■□□□□ 0.23
NEK3-202ENST00000550841 LINC00482Q8N8I6 264 aa16.51■□□□□ 0.23
NEK3-202ENST00000550841 TMEM170AQ8WVE7 144 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms