RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 P0C879 139 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 BMI1P35226 326 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 RNASE12Q5GAN4 147 aaKnown RBP10.66□□□□□ -0.7
COL2A1-209ENST00000546974 TMEM116Q8NCL8 245 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 C15orf40Q8WUR7 153 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 GALNT14Q96FL9 552 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 RNF2Q99496 336 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 RHPN1-AS1Q9BWJ2 59 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 EXTL2Q9UBQ6 330 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 TRAV14DV4A0A0A6YYC5 116 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 A0A0B4J293 547 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 GNG7O60262 68 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 YIF1AO95070 293 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 IGKV1-5P01602 117 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 SMIM18P0DKX4 95 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 PI3P19957 117 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 CMC4P56277 68 aaPredicted RBP10.65□□□□□ -0.7
COL2A1-209ENST00000546974 TNFRSF9Q07011 255 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 IZUMO4Q1ZYL8 232 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 STPG3Q8N7X2 389 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 TMEM229BQ8NBD8 167 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 ZFAND1Q8TCF1 268 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 PINX1Q96BK5 328 aaKnown RBP10.65□□□□□ -0.7
COL2A1-209ENST00000546974 TP53RKQ96S44 253 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 ABHD1Q96SE0 405 aa10.65□□□□□ -0.7
COL2A1-209ENST00000546974 C3orf85A0A1B0GTC6 90 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 IGHV3-48P01763 117 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 CD74P04233 296 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 SNCAP37840 140 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 NPBWR1P48145 328 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 AKR1C2P52895 323 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 TAS2R19P59542 299 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 DEFB135Q30KP9 77 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 FAM90A2PQ658T7 463 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 PVRIGQ6DKI7 326 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 CCDC71LQ8N9Z2 235 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 DUSP18Q8NEJ0 188 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 TERB2Q8NHR7 220 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 RNF183Q96D59 192 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 C6orf62Q9GZU0 229 aaPredicted RBP10.64□□□□□ -0.71
COL2A1-209ENST00000546974 COPZ2Q9P299 210 aa10.64□□□□□ -0.71
COL2A1-209ENST00000546974 IGHV3-49A0A0A0MS15 119 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 A0A0J9YWU9 116 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 ST8SIA3O43173 380 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 B3GALNT1O75752 331 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 IFNA17P01571 189 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 CD5P06127 495 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 RPL35AP18077 110 aaKnown RBP10.63□□□□□ -0.71
COL2A1-209ENST00000546974 PPP5CP53041 499 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 SUB1P53999 127 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL2A1-209ENST00000546974 SSBP1Q04837 148 aaKnown RBP10.63□□□□□ -0.71
COL2A1-209ENST00000546974 SPINK9Q5DT21 86 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 GPR107Q5VW38 600 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 TOMM20LQ6UXN7 152 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 LYG2Q86SG7 212 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 SLC35G3Q8N808 338 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 OR4D10Q8NGI6 311 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 GINS3Q9BRX5 216 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 PDCD10Q9BUL8 212 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 MAP6D1Q9H9H5 199 aa10.63□□□□□ -0.71
COL2A1-209ENST00000546974 GABARAPH6UMI1 98 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 CORTO00230 105 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 RAB3DO95716 219 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 ATF4P18848 351 aaPredicted RBP10.62□□□□□ -0.71
COL2A1-209ENST00000546974 UCP1P25874 307 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 PAFAH1B2P68402 229 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 TRIM16LQ309B1 348 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 SP6Q3SY56 376 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 STEAP1BQ6NZ63 245 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 ZNF600Q6ZNG1 722 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 OR13C8Q8NGS7 320 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 RRNAD1Q96FB5 475 aaKnown RBP10.62□□□□□ -0.71
COL2A1-209ENST00000546974 MIXL1Q9H2W2 232 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 VSIRQ9H7M9 311 aa10.62□□□□□ -0.71
COL2A1-209ENST00000546974 IGHV3OR16-13A0A075B7E8 117 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 IGHV3-74A0A0B4J1X5 117 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 TMEM50AO95807 157 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 RNASE2P10153 161 aaKnown RBP10.61□□□□□ -0.71
COL2A1-209ENST00000546974 ETV6P41212 452 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 TFPI2P48307 235 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 MRPS10P82664 201 aaKnown RBP10.61□□□□□ -0.71
COL2A1-209ENST00000546974 SCGB2B2Q4G0G5 96 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 TCF24Q7RTU0 167 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 MARCH1Q8TCQ1 289 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 MRPS26Q9BYN8 205 aaKnown RBP10.61□□□□□ -0.71
COL2A1-209ENST00000546974 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 FRAS1Q86XX4 4008 aa10.61□□□□□ -0.71
COL2A1-209ENST00000546974 DNAH6Q9C0G6 4158 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 CXorf65A6NEN9 183 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 NUPR2A6NF83 97 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 RPL5P46777 297 aaKnown RBP10.6□□□□□ -0.71
COL2A1-209ENST00000546974 HOXA1P49639 335 aaPredicted RBP10.6□□□□□ -0.71
COL2A1-209ENST00000546974 EWSR1Q01844 656 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL2A1-209ENST00000546974 MEF2DQ14814 521 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 ZNF124Q15973 351 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 FAM219AQ8IW50 185 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 GBGT1Q8N5D6 347 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 ST8SIA2Q92186 375 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms