RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 RABL2AQ9UBK7 228 aaPredicted RBP6.99□□□□□ -1.29
YBX3-218ENST00000546298 SMPXQ9UHP9 88 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 RABL2BQ9UNT1 228 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 TRAV14DV4A0A0A6YYC5 116 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 IGHV7-4-1A0A0J9YVY3 117 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 F8W735 103 aaPredicted RBP6.98□□□□□ -1.29
YBX3-218ENST00000546298 INS-IGF2F8WCM5 200 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 GABARAPH6UMI1 98 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 CORTO00230 105 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 SCGB2A1O75556 95 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 IFNA17P01571 189 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 CTSDP07339 412 aaPredicted RBP6.98□□□□□ -1.29
YBX3-218ENST00000546298 SMIM18P0DKX4 95 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 PI3P19957 117 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 PPP5CP53041 499 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 MEF2DQ14814 521 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 SCGB2B2Q4G0G5 96 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 Q6ZWC4 215 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 FAM219AQ8IW50 185 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 STPG3Q8N7X2 389 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 TMEM116Q8NCL8 245 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 RNASE11Q8TAA1 199 aaKnown RBP6.98□□□□□ -1.29
YBX3-218ENST00000546298 PINX1Q96BK5 328 aaKnown RBP6.98□□□□□ -1.29
YBX3-218ENST00000546298 OVOL2Q9BRP0 275 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 NXF2Q9GZY0 626 aaKnown RBP6.98□□□□□ -1.29
YBX3-218ENST00000546298 TP53TG1Q9Y2A0 90 aa6.98□□□□□ -1.29
YBX3-218ENST00000546298 NBEAL2Q6ZNJ1 2754 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 IGHV3OR16-8A0A075B7F1 116 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 A0A0B4J293 547 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 KIR2DL5BA0A0G2JN68 375 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 KIR2DL5BA0A0G2JPC4 375 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 DISC1C4P0D8 188 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 CHEK1O14757 476 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 ZNF207O43670 478 aaKnown RBP6.97□□□□□ -1.29
YBX3-218ENST00000546298 IGKV1-5P01602 117 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 UCP1P25874 307 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 HOXA1P49639 335 aaPredicted RBP6.97□□□□□ -1.29
YBX3-218ENST00000546298 PAFAH1B2P68402 229 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 SURF2Q15527 256 aaPredicted RBP6.97□□□□□ -1.29
YBX3-218ENST00000546298 STEAP1BQ6NZ63 245 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 KIR2DL5AQ8N109 375 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 OR13C8Q8NGS7 320 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 KIR2DL5BQ8NHK3 375 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 GALNT14Q96FL9 552 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 OR10C1Q96KK4 312 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 TP53RKQ96S44 253 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 UBQLN2Q9UHD9 624 aa6.97□□□□□ -1.29
YBX3-218ENST00000546298 C14orf166Q9Y224 244 aaKnown RBP6.97□□□□□ -1.29
YBX3-218ENST00000546298 TEX13DA0A0J9YY54 714 aaPredicted RBP6.96□□□□□ -1.3
YBX3-218ENST00000546298 CTDSP2O14595 271 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 ST8SIA3O43173 380 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 SPRY2O43597 315 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 P0C879 139 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 ETV6P41212 452 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 ALDH3B2P48448 385 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 DHODHQ02127 395 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 IZUMO4Q1ZYL8 232 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 ODF3L2Q3SX64 289 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 SP6Q3SY56 376 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 SPINK9Q5DT21 86 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 ZNF600Q6ZNG1 722 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 WFDC3Q8IUB2 231 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 MARCH1Q8TCQ1 289 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 RAB2BQ8WUD1 216 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 SMIM4Q8WVI0 70 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 DIRAS2Q96HU8 199 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 RNF2Q99496 336 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 BCL7BQ9BQE9 202 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 TMEM222Q9H0R3 208 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 TMEM231Q9H6L2 316 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.96□□□□□ -1.3
YBX3-218ENST00000546298 CACFD1Q9UGQ2 172 aa6.96□□□□□ -1.3
YBX3-218ENST00000546298 RPS10-NUDT3A0A1W2PQS6 291 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 A0A1W2PS18 150 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 LCE2BO14633 110 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 CTDSPLO15194 276 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 NOL3O60936 208 aaKnown RBP6.95□□□□□ -1.3
YBX3-218ENST00000546298 CDS2O95674 445 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 TMEM50AO95807 157 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 IGHV3-48P01763 117 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 AKAIN1P0CW23 69 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 RPL5P46777 297 aaKnown RBP6.95□□□□□ -1.3
YBX3-218ENST00000546298 TMBIM6P55061 237 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 SPCS3P61009 180 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 IL18Q14116 193 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 TOMM20LQ6UXN7 152 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 CLVS1Q8IUQ0 354 aaPredicted RBP6.95□□□□□ -1.3
YBX3-218ENST00000546298 TMEM217Q8N7C4 229 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 OR4D10Q8NGI6 311 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 OR52E5Q8NH55 327 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 SCGB3A2Q96PL1 93 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 PRRT1Q99946 306 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 MIXL1Q9H2W2 232 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 KCNIP3Q9Y2W7 256 aa6.95□□□□□ -1.3
YBX3-218ENST00000546298 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 DNAH9Q9NYC9 4486 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 TRAV30A0A087WSZ9 112 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 IGHV3-49A0A0A0MS15 119 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 DNASE2O00115 360 aaPredicted RBP6.94□□□□□ -1.3
YBX3-218ENST00000546298 CLN5O75503 358 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms