RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 LOC102723996A0A087X1L8 192 aa7.13□□□□□ -1.27
ABCB1-210ENST00000543898 OR4C46A6NHA9 309 aa7.13□□□□□ -1.27
ABCB1-210ENST00000543898 MLNRO43193 412 aa7.13□□□□□ -1.27
ABCB1-210ENST00000543898 LEPROTL1O95214 131 aa7.13□□□□□ -1.27
ABCB1-210ENST00000543898 TSPOP30536 169 aa7.13□□□□□ -1.27
ABCB1-210ENST00000543898 HSPE1P61604 102 aaKnown RBP7.13□□□□□ -1.27
ABCB1-210ENST00000543898 ZNF788Q6ZQV5 615 aa7.13□□□□□ -1.27
ABCB1-210ENST00000543898 PPP1R32Q7Z5V6 425 aa7.13□□□□□ -1.27
ABCB1-210ENST00000543898 SAP25Q8TEE9 199 aa7.13□□□□□ -1.27
ABCB1-210ENST00000543898 H1FXQ92522 213 aaKnown RBP7.13□□□□□ -1.27
ABCB1-210ENST00000543898 RCHY1Q96PM5 261 aa7.13□□□□□ -1.27
ABCB1-210ENST00000543898 IGHV3-21A0A0B4J1V1 117 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 BMPR1BO00238 502 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 LINC00869P0C866 280 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 LHX2P50458 406 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 ZNF83P51522 516 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 SLC35E4Q6ICL7 350 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 COLCA1Q6ZS62 124 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 Q6ZSR3 168 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 CLEC7AQ9BXN2 247 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 COL25A1Q9BXS0 654 aaPredicted RBP7.12□□□□□ -1.27
ABCB1-210ENST00000543898 LINC00470Q9BZP3 86 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 CDC42EP3Q9UKI2 254 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 TRGV10A0A0A0MS01 117 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 TRBV6-6A0A0A6YYG2 114 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 A4D1N5 150 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.12□□□□□ -1.27
ABCB1-210ENST00000543898 SP1P08047 785 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 IGLC2P0DOY2 106 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 IGLC3P0DOY3 106 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 MYOD1P15172 320 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 ARF6P62330 175 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 TNXAQ16473 311 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 FAM162BQ5T6X4 162 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 SLC25A34Q6PIV7 304 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 PRSS3P2Q8NHM4 247 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 CACNG8Q8WXS5 425 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 PGLYRP4Q96LB8 373 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 PAXXQ9BUH6 204 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 TRAV9-1A0A075B6T8 112 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 MPV17P39210 176 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 REG1BP48304 166 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 OR1B1Q8NGR6 318 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 FLYWCH2Q96CP2 140 aaKnown RBP7.12□□□□□ -1.27
ABCB1-210ENST00000543898 LINC00479Q96M42 142 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 SRSF8Q9BRL6 282 aaKnown RBP7.12□□□□□ -1.27
ABCB1-210ENST00000543898 TMEM70Q9BUB7 260 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 MCRIP2Q9BUT9 160 aaKnown RBP7.12□□□□□ -1.27
ABCB1-210ENST00000543898 MAP1LC3CQ9BXW4 147 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 HES4Q9HCC6 221 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 METRNQ9UJH8 293 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 PCNX1Q96RV3 2341 aa7.12□□□□□ -1.27
ABCB1-210ENST00000543898 TRAV9-2A0A087WT02 112 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 ISLRO14498 428 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 C8orf88P0DMB2 117 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 HIST1H1EP10412 219 aaKnown RBP7.11□□□□□ -1.27
ABCB1-210ENST00000543898 FA2HQ7L5A8 372 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 MOGAT3Q86VF5 341 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 P01737 135 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 OR5AL1P0C617 328 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 ID1P41134 155 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 MPV17L2Q567V2 206 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 C10orf113Q5VZT2 155 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 ZNF841Q6ZN19 808 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 LHFPL4Q7Z7J7 247 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 PDPNQ86YL7 162 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 ZNF479Q96JC4 524 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 CACNA1HO95180 2353 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 TSKUQ8WUA8 353 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 ORAOV1Q8WV07 137 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 K7EN84 100 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 M0R1B8 84 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 TDGF1P13385 188 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 DUTP33316 252 aaKnown RBP7.11□□□□□ -1.27
ABCB1-210ENST00000543898 CCL11P51671 97 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 SUB1P53999 127 aaKnown RBP eCLIP7.11□□□□□ -1.27
ABCB1-210ENST00000543898 RBPJQ06330 500 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 PLGLAQ15195 96 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 NRN1LQ496H8 165 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 OR10J3Q5JRS4 329 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 ACP7Q6ZNF0 438 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 ARFGEF3Q5TH69 2177 aa7.11□□□□□ -1.27
ABCB1-210ENST00000543898 SPTBN1Q01082 2364 aaKnown RBP7.1□□□□□ -1.27
ABCB1-210ENST00000543898 TRAV5A0A0B4J249 113 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 PGPA6NDG6 321 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 PRB4P10163 310 aaPredicted RBP7.1□□□□□ -1.27
ABCB1-210ENST00000543898 COL8A1P27658 744 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 CA7P43166 264 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 CX3CL1P78423 397 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 Q0VG73 95 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 RNFT1Q5M7Z0 435 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 FAM201AQ5SY85 155 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 MOB3BQ86TA1 216 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 OR8A1Q8NGG7 326 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 RAB1CQ92928 201 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 RAB37Q96AX2 223 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 YLPM1P49750 1951 aaKnown RBP7.1□□□□□ -1.27
ABCB1-210ENST00000543898 GAGE12BA1L429 117 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 IZUMO1RA6ND01 250 aa7.1□□□□□ -1.27
ABCB1-210ENST00000543898 HIGD1CA8MV81 97 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms