RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CACNG8Q8WXS5 425 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 NABP1Q96AH0 204 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 TMEM186Q96B77 213 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 ARL6IP6Q8N6S5 226 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 DIRC2Q96SL1 478 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 ZNF703Q9H7S9 590 aaPredicted RBP16.19■□□□□ 0.18
SUDS3-204ENST00000543473 ECSCRQ19T08 205 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 FGFBP3Q8TAT2 258 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 ELOVL5Q9NYP7 299 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 SEMA5BQ9P283 1151 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 A0A1W2PRE2 83 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 H7C2G1 150 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 STAG3L3P0CL85 134 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 SNCGO76070 127 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 IGKV1-5P01602 117 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 UNQ5815/PRO19632Q6UWF5 114 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 PLXNA3P51805 1871 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.18■□□□□ 0.18
SUDS3-204ENST00000543473 HILPDAQ9Y5L2 63 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 TDGF1P3P51864 188 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 TMEM14EPQ6UXP3 125 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 C5orf24Q7Z6I8 188 aa16.18■□□□□ 0.18
SUDS3-204ENST00000543473 CA1P00915 261 aaPredicted RBP16.17■□□□□ 0.18
SUDS3-204ENST00000543473 ZFP36L1Q07352 338 aaKnown RBP16.17■□□□□ 0.18
SUDS3-204ENST00000543473 ZIC4Q8N9L1 334 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 OR9G1Q8NH87 305 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 KLK15Q9H2R5 256 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 ZNF581Q9P0T4 197 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 CLPSP04118 112 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 TMPRSS3P57727 454 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 TMEM160Q9NX00 188 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 RELQ04864 619 aaPredicted RBP16.17■□□□□ 0.18
SUDS3-204ENST00000543473 Q6ZT83 130 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 SRCAPQ6ZRS2 3230 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 OR11H12B2RN74 326 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 C9orf172C9J069 976 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 CCDC144NLQ6NUI1 221 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 TREML4Q6UXN2 200 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 OR11H1Q8NG94 326 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 OR11H2Q8NH07 326 aa16.17■□□□□ 0.18
SUDS3-204ENST00000543473 CGB1A6NKQ9 187 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 C17orf82Q86X59 251 aaPredicted RBP16.16■□□□□ 0.18
SUDS3-204ENST00000543473 TTC9CQ8N5M4 171 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 PTPRDP23468 1912 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 MFAP4P55083 255 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 SPTAN1Q13813 2472 aaKnown RBP16.16■□□□□ 0.18
SUDS3-204ENST00000543473 OR9G9P0C7N8 305 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 PSG9Q00887 426 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 VOPP1Q96AW1 172 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 F2RL2O00254 374 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 MTURNQ8N3F0 131 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 PNKDQ8N490 385 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 FNDC4Q9H6D8 234 aaPredicted RBP16.16■□□□□ 0.18
SUDS3-204ENST00000543473 LPAR2Q9HBW0 351 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 JKAMPQ9P055 326 aa16.16■□□□□ 0.18
SUDS3-204ENST00000543473 PHF3Q92576 2039 aaKnown RBP16.15■□□□□ 0.18
SUDS3-204ENST00000543473 IL4P05112 153 aa16.15■□□□□ 0.18
SUDS3-204ENST00000543473 FMC1Q96HJ9 113 aa16.15■□□□□ 0.18
SUDS3-204ENST00000543473 GGTLC1Q9BX51 225 aa16.15■□□□□ 0.18
SUDS3-204ENST00000543473 C19orf67A6NJJ6 358 aa16.15■□□□□ 0.18
SUDS3-204ENST00000543473 C5orf30Q96GV9 206 aa16.15■□□□□ 0.18
SUDS3-204ENST00000543473 TRBV20OR9-2A0A075B6H5 130 aa16.15■□□□□ 0.18
SUDS3-204ENST00000543473 C15orf61A6NNL5 157 aa16.15■□□□□ 0.18
SUDS3-204ENST00000543473 CDX4O14627 284 aaPredicted RBP16.15■□□□□ 0.18
SUDS3-204ENST00000543473 MEGF9Q9H1U4 602 aa16.15■□□□□ 0.18
SUDS3-204ENST00000543473 KLF2Q9Y5W3 355 aaPredicted RBP16.15■□□□□ 0.18
SUDS3-204ENST00000543473 TRAV30A0A087WSZ9 112 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 CX3CL1P78423 397 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 KIAA2026Q5HYC2 2103 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 KBTBD11-OT1A0A1B0GTJ5 212 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 GNG5P63218 68 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 NEUROG1Q92886 237 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 SNHG12Q9BXW3 62 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 ST20Q9HBF5 79 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 A0A1B0GWB2 263 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 NTN3O00634 580 aaPredicted RBP16.14■□□□□ 0.17
SUDS3-204ENST00000543473 SFTPCP11686 197 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 HIST1H1AQ02539 215 aaPredicted RBP16.14■□□□□ 0.17
SUDS3-204ENST00000543473 GP6Q9HCN6 339 aa16.14■□□□□ 0.17
SUDS3-204ENST00000543473 CECR9P0C854 216 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 ZNF256Q9Y2P7 627 aaPredicted RBP16.13■□□□□ 0.17
SUDS3-204ENST00000543473 MUC21A0A0G2JKD1 596 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 MUC21A0A140T8X8 626 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 PFN1P07737 140 aaKnown RBP16.13■□□□□ 0.17
SUDS3-204ENST00000543473 DUTP33316 252 aaKnown RBP16.13■□□□□ 0.17
SUDS3-204ENST00000543473 MUC21Q5SSG8 566 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 FAM201AQ5SY85 155 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 MRPL52Q86TS9 123 aaKnown RBP16.13■□□□□ 0.17
SUDS3-204ENST00000543473 RNASEH2CQ8TDP1 164 aaKnown RBP16.13■□□□□ 0.17
SUDS3-204ENST00000543473 A0A0G2JRQ6 117 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 IQCF6A8MYZ5 107 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 COX6CP09669 75 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 GFRA1P56159 465 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 BMPERQ8N8U9 685 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 FANCMQ8IYD8 2048 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 LOC102723996A0A087X1L8 192 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 CELA3BP08861 270 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 PYYP10082 97 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 AMMECR1LQ6DCA0 310 aa16.13■□□□□ 0.17
SUDS3-204ENST00000543473 PRR19A6NJB7 356 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms