RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PF4V1P10720 104 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 COX6A1P12074 109 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 CRISP2P16562 243 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 CEBPDP49716 269 aaPredicted RBP4.37□□□□□ -1.71
PROM1-220ENST00000540805 SRSF6Q13247 344 aaKnown RBP4.37□□□□□ -1.71
PROM1-220ENST00000540805 SPATA45Q537H7 98 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 PCSK4Q6UW60 755 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 TMEM14EPQ6UXP3 125 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 Q8IYB0 196 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 FAM19A2Q8N3H0 131 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 OR4B1Q8NGF8 309 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 SGMS2Q8NHU3 365 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 BLNKQ8WV28 456 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 SF3B5Q9BWJ5 86 aaKnown RBP4.37□□□□□ -1.71
PROM1-220ENST00000540805 SPRY4Q9C004 299 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 MPC1Q9Y5U8 109 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 MAST4O15021 2626 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 LOC102723996A0A087X1L8 192 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 C1QTNF9P0C862 333 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 CBLN1P23435 193 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 YPEL3P61236 119 aaPredicted RBP4.37□□□□□ -1.71
PROM1-220ENST00000540805 PCOLCEQ15113 449 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 RNFT1Q5M7Z0 435 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 INO80CQ6PI98 192 aaPredicted RBP4.37□□□□□ -1.71
PROM1-220ENST00000540805 ZIC4Q8N9L1 334 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 LEAP2Q969E1 77 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 DERL1Q9BUN8 251 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 NRN1Q9NPD7 142 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 IL36RNQ9UBH0 155 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 COX11Q9Y6N1 276 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 C9orf172C9J069 976 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 ZIC3O60481 467 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 OR2J3O76001 311 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 HAND1O96004 215 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 NPPCP23582 126 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 THBS3P49746 956 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 SLC35B1P78383 322 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 KRTAP27-1Q3LI81 207 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 FAM201AQ5SY85 155 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 AMMECR1LQ6DCA0 310 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 VWA1Q6PCB0 445 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 BAGE2Q86Y30 109 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 MED12LQ86YW9 2145 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 C11orf44Q8N8P7 122 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 SLC24A4Q8NFF2 622 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 SFRP2Q96HF1 295 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 RASL11BQ9BPW5 248 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 MCRIP2Q9BUT9 160 aaKnown RBP4.37□□□□□ -1.71
PROM1-220ENST00000540805 GSX1Q9H4S2 264 aaPredicted RBP4.37□□□□□ -1.71
PROM1-220ENST00000540805 WIPI2Q9Y4P8 454 aa4.37□□□□□ -1.71
PROM1-220ENST00000540805 F5H697 171 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 TGFAP01135 160 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 ESDP10768 282 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 LGALS7P47929 136 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 TFF3Q07654 80 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 SPACA3Q8IXA5 215 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 MUC15Q8N387 334 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 ZNF114Q8NC26 417 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 CORO2AQ92828 525 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 NEUROG1Q92886 237 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 HS3ST6Q96QI5 342 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 KCNIP2Q9NS61 270 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 A0A0G2JMM0 328 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 A0A1W2PPB8 328 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 A0A1W2PRS3 328 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 KIR3DP1A8MWS1 328 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 NDUFB4O95168 129 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 IGHV3-48P01763 117 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 NTF3P20783 257 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 ATP5G3P48201 142 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 LYZP61626 148 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 ZNF90Q03938 601 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 OR8I2Q8N0Y5 310 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 OR52L2PQ8NGH6 319 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 OR5B3Q8NH48 314 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 OR5P3Q8WZ94 311 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 HARBI1Q96MB7 349 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 NPCDR1Q9BY65 106 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 MRPL18Q9H0U6 180 aaKnown RBP4.36□□□□□ -1.71
PROM1-220ENST00000540805 ZNF586Q9NXT0 402 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 SLC25A10Q9UBX3 287 aaPredicted RBP4.36□□□□□ -1.71
PROM1-220ENST00000540805 CHCHD2Q9Y6H1 151 aaPredicted RBP4.36□□□□□ -1.71
PROM1-220ENST00000540805 IGHV3OR16-13A0A075B7E8 117 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 TRBV6-6A0A0A6YYG2 114 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 IGHV3-74A0A0B4J1X5 117 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 IGHV2OR16-5A0A0B4J2B6 119 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 HNRNPA3P51991 378 aaKnown RBP4.36□□□□□ -1.71
PROM1-220ENST00000540805 TCTAP57738 103 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 SUMO1P63165 101 aaKnown RBP4.36□□□□□ -1.71
PROM1-220ENST00000540805 TIGITQ495A1 244 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 ZNF585BQ52M93 769 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 C20orf204Q6ZNR8 217 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 ZNF788Q6ZQV5 615 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 LINC00596Q86U02 117 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 SIGLECL1Q8N7X8 197 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 Q8N976 141 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 OR10G8Q8NGN5 311 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 SPSB4Q96A44 273 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 RCHY1Q96PM5 261 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms