RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 SPIN3Q5JUX0 258 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.74□□□□□ -1.65
CPSF7-219ENST00000539952 ETV3LQ6ZN32 361 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 SLC25A26Q70HW3 274 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 LHFPL4Q7Z7J7 247 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 WDR86Q86TI4 376 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 MRPL52Q86TS9 123 aaKnown RBP4.74□□□□□ -1.65
CPSF7-219ENST00000539952 TBC1D26Q86UD7 250 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM219Q86XT9 240 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM183AQ8IXX5 376 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 ZNRF1Q8ND25 227 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 OR11H6Q8NGC7 330 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 OR10A7Q8NGE5 316 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 OR5D18Q8NGL1 313 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 OR10D4PQ8NGN7 298 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 Q8WTZ3 238 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2BHQ93079 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 SDSLQ96GA7 329 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 OR5B12Q96R08 314 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2BNQ99877 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 HIST1H2BMQ99879 126 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 RARRES2Q99969 163 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 TXNDC17Q9BRA2 123 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 PYGO2Q9BRQ0 406 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 C2orf88Q9BSF0 95 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 CABLES2Q9BTV7 478 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 PARP12Q9H0J9 701 aaKnown RBP4.74□□□□□ -1.65
CPSF7-219ENST00000539952 NAT8Q9UHE5 227 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 DNAH9Q9NYC9 4486 aa4.74□□□□□ -1.65
CPSF7-219ENST00000539952 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 IGKV1D-17A0A075B6S4 117 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 IGSF23A1L1A6 192 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 PPP5D1E7EU14 171 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 SLC31A2O15432 143 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 TUSC2O75896 110 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 TRGC2P03986 189 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 METTL15P1P0C7V9 234 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 TRGC1P0CF51 173 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 BCL2P10415 239 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 COX7A1P24310 79 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 DDTP30046 118 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 BRS3P32247 399 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 FHITP49789 147 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 HAGHQ16775 308 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM241Q24JQ0 296 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 NMSQ5H8A3 153 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 MINOS1Q5TGZ0 78 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 KCNIP4Q6PIL6 250 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 DYNAPQ8N1N2 210 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 TCTEX1D1Q8N7M0 179 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 ZBTB34Q8NCN2 500 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 OR5P3Q8WZ94 311 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM18Q96B42 140 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 TP53RKQ96S44 253 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 IMMP2LQ96T52 175 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 SH3BGRL3Q9H299 93 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 Q9N2K0 584 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 SLC39A9Q9NUM3 307 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 MINOS1-NBL1R4GNA1 71 aa4.73□□□□□ -1.65
CPSF7-219ENST00000539952 A0A087X0M5 115 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 hCG_38984A0A1B0GV85 526 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 A0A1B0GX30 115 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 ZNF727A8MUV8 499 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 ODF3BA8MYP8 253 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 NPIPB11E5RHQ5 1161 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 M0QZK8 103 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 SYNGR2O43760 224 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 SSSCA1O60232 199 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 GGCTO75223 188 aaKnown RBP4.72□□□□□ -1.65
CPSF7-219ENST00000539952 NAPSAO96009 420 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 RBP4P02753 201 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 SERPINE2P07093 398 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 CXCL1P09341 107 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 RAB4AP20338 218 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 F2RP25116 425 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 PRDX2P32119 198 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 CEBPDP49716 269 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-219ENST00000539952 PSMB3P49720 205 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 FAM3BP58499 235 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-219ENST00000539952 CCL20P78556 96 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 RPL19P84098 196 aaKnown RBP4.72□□□□□ -1.65
CPSF7-219ENST00000539952 PRDX4Q13162 271 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 ANKRD39Q53RE8 183 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM41BQ5BJD5 291 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 KHDC1LQ5JSQ8 128 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 PLCXD3Q63HM9 321 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 MOB1BQ7L9L4 216 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 RTN4RL2Q86UN3 420 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 THNSL2Q86YJ6 484 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 CYB561D1Q8N8Q1 229 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 OR5A2Q8NGI9 324 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 PIGCQ92535 297 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 BSCL2Q96G97 398 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-219ENST00000539952 C14orf144Q96I85 54 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 PACRGQ96M98 296 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-219ENST00000539952 ASCL2Q99929 193 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 MAGT1Q9H0U3 335 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 MANBALQ9NQG1 85 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 HILPDAQ9Y5L2 63 aa4.72□□□□□ -1.65
CPSF7-219ENST00000539952 UBR4Q5T4S7 5183 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms