RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PRSS8Q16651 343 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 ACOT6Q3I5F7 207 aaPredicted RBP13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 C1orf194Q5T5A4 169 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 ZNF833PQ6ZTB9 187 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 ABHD12Q8N2K0 398 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 OR10X1Q8NGY0 326 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 DTD1Q8TEA8 209 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 SPOCK3Q9BQ16 436 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 TMEM208Q9BTX3 173 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 FKBP11Q9NYL4 201 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 POLR3KQ9Y2Y1 108 aaPredicted RBP13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 VPS13CQ709C8 3753 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 DLEU1O43261 78 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 REG1BP48304 166 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 ZNF709Q8N972 641 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 C8orf46Q8TAG6 207 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 ZDHHC16Q969W1 377 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 TMEM133Q9H2Q1 129 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 LRRK2Q5S007 2527 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 OR9G9P0C7N8 305 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 RPL29P47914 159 aaKnown RBP13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 OR4S2Q8NH73 311 aa13.85□□□□□ -0.19
PCDHB17P-201ENST00000539533 KIR2DL5BA0A0G2JN68 375 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 KIR2DL5BA0A0G2JPC4 375 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 C11orf94C9JXX5 98 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 DEFA4P12838 97 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 NPPCP23582 126 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 KIR2DS2P43631 304 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 VWC2Q2TAL6 325 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 KCNIP4Q6PIL6 250 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 KIR2DL5AQ8N109 375 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 LINC00311Q8N616 119 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 LY6G5BQ8NDX9 201 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 OR9G1Q8NH87 305 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 ZNF596Q8TC21 504 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 ADTRPQ96IZ2 230 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 FAM208BQ5VWN6 2430 aa13.84□□□□□ -0.19
PCDHB17P-201ENST00000539533 RBMXL2O75526 392 aaKnown RBP13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 RPLP1P05386 114 aaKnown RBP13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 NPSP0C0P6 89 aa13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 ZNF705AQ6ZN79 300 aaPredicted RBP13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 GBGT1Q8N5D6 347 aa13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 C8orf31Q8N9H6 132 aa13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 OR5T1Q8NG75 326 aa13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 IGFBPL1Q8WX77 278 aa13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 SSBP3Q9BWW4 388 aaPredicted RBP13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 MRPL20Q9BYC9 149 aaKnown RBP13.83□□□□□ -0.19
PCDHB17P-201ENST00000539533 CHD6Q8TD26 2715 aa13.83□□□□□ -0.2
PCDHB17P-201ENST00000539533 IGKV1-16P04430 117 aa13.83□□□□□ -0.2
PCDHB17P-201ENST00000539533 CHRNA7P36544 502 aa13.83□□□□□ -0.2
PCDHB17P-201ENST00000539533 CIB3Q96Q77 187 aaPredicted RBP13.83□□□□□ -0.2
PCDHB17P-201ENST00000539533 ONECUT1Q9UBC0 465 aa13.83□□□□□ -0.2
PCDHB17P-201ENST00000539533 TRAV3A0A0B4J244 114 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 A1L4Q6 167 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 GOSR1O95249 250 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 IGHV4-39P01824 125 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 LIPFP07098 398 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 ST6GALNAC6Q969X2 333 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 NAGKQ9UJ70 344 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 IGHV2-26A0A0B4J1V2 119 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 C17orf112F2Z3M2 114 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 CDC34P49427 236 aaPredicted RBP13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 CNN1P51911 297 aaKnown RBP13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 ARF6P62330 175 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 LCN2P80188 198 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 SPINK9Q5DT21 86 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 QTRT1Q9BXR0 403 aaKnown RBP13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 SLC35D1Q9NTN3 355 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 TMEM140Q9NV12 185 aa13.82□□□□□ -0.2
PCDHB17P-201ENST00000539533 LOC105371242A0A075B767 164 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 ZNF705FA8MVS1 300 aaPredicted RBP13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 ZNF705DP0CH99 300 aaPredicted RBP13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 ZNF705BP0CI00 300 aaPredicted RBP13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 IL3RAP26951 378 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 ERVK-16P61578 105 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 FAM78BQ5VT40 261 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 LINC01551Q86U37 167 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 Q8N7P7 452 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 TMEM186Q96B77 213 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 CCL19Q99731 98 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 BPESC1Q9GZL8 116 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 M0QZK8 103 aa13.81□□□□□ -0.2
PCDHB17P-201ENST00000539533 PDE6DO43924 150 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 CD99P14209 185 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 COX7A1P24310 79 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 ZFP36P26651 326 aaKnown RBP13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 OR10J1P30954 320 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 PCP4P48539 62 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 SPG11Q96JI7 2443 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 SVEP1Q4LDE5 3571 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 KMT2BQ9UMN6 2715 aaPredicted RBP13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 MED13LQ71F56 2210 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 SRRM4A7MD48 611 aaKnown RBP13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 IGLV1-47P01700 117 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 RPL15P61313 204 aaKnown RBP13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 GNB1P62873 340 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 RELBQ01201 579 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 RTL8BQ17RB0 113 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 OR4A16Q8NH70 328 aa13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 NABP2Q9BQ15 211 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms