RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 MISP3Q96FF7 219 aa17.35■□□□□ 0.37
SFSWAP-204ENST00000535399 ELOVL1Q9BW60 279 aa17.35■□□□□ 0.37
SFSWAP-204ENST00000535399 ENY2Q9NPA8 101 aa17.35■□□□□ 0.37
SFSWAP-204ENST00000535399 C21orf62Q9NYP8 219 aa17.35■□□□□ 0.37
SFSWAP-204ENST00000535399 A0A1B0GU03 582 aa17.34■□□□□ 0.37
SFSWAP-204ENST00000535399 F8W735 103 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-204ENST00000535399 I3L2K1 104 aa17.34■□□□□ 0.37
SFSWAP-204ENST00000535399 OR4E1P0C645 316 aa17.34■□□□□ 0.37
SFSWAP-204ENST00000535399 GPR183P32249 361 aa17.34■□□□□ 0.37
SFSWAP-204ENST00000535399 SNCAP37840 140 aa17.34■□□□□ 0.37
SFSWAP-204ENST00000535399 UPK1BO75841 260 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 NXPH3O95157 252 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 TCRBP04435 133 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 DHRS2Q13268 280 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 BSXQ3C1V8 233 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 LYG2Q86SG7 212 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 GPHB5Q86YW7 130 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 OR4C12Q96R67 309 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 ATP6V0BQ99437 205 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 C20orf85Q9H1P6 137 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 ZC4H2Q9NQZ6 224 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 ZMAT5Q9UDW3 170 aaKnown RBP17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 CACFD1Q9UGQ2 172 aa17.33■□□□□ 0.36
SFSWAP-204ENST00000535399 WI2-2373I1.2A0A1W2PRP0 233 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 PITX3O75364 302 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 MT-CO2P00403 227 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 CSN3P07498 182 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 IFITM3Q01628 133 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 TNFRSF9Q07011 255 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 ASAH1Q13510 395 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 C11orf87Q6NUJ2 197 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 HSPB7Q9UBY9 170 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 TMED3Q9Y3Q3 217 aa17.32■□□□□ 0.36
SFSWAP-204ENST00000535399 CEBPZOSA8MTT3 80 aa17.31■□□□□ 0.36
SFSWAP-204ENST00000535399 TGOLN2O43493 480 aa17.31■□□□□ 0.36
SFSWAP-204ENST00000535399 SLC25A6P12236 298 aa17.31■□□□□ 0.36
SFSWAP-204ENST00000535399 SUB1P53999 127 aaKnown RBP eCLIP17.31■□□□□ 0.36
SFSWAP-204ENST00000535399 OR2T8A6NH00 312 aa17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 K7EIL1 84 aa17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 LGALS9O00182 355 aa17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 HOXB5P09067 269 aa17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 C4orf46Q504U0 113 aa17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 GGNBP1Q5YKI7 109 aa17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 PLET1Q6UQ28 207 aa17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 PINX1Q96BK5 328 aaKnown RBP17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 BSCL2Q96G97 398 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 HEYLQ9NQ87 328 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 SIGLEC8Q9NYZ4 499 aa17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 PEMTQ9UBM1 199 aa17.3■□□□□ 0.36
SFSWAP-204ENST00000535399 IGHV3-48P01763 117 aa17.29■□□□□ 0.36
SFSWAP-204ENST00000535399 HTR2BP41595 481 aa17.29■□□□□ 0.36
SFSWAP-204ENST00000535399 MZT2BQ6NZ67 158 aa17.29■□□□□ 0.36
SFSWAP-204ENST00000535399 ADAMTSL5Q6ZMM2 481 aa17.29■□□□□ 0.36
SFSWAP-204ENST00000535399 HAPLN4Q86UW8 402 aa17.29■□□□□ 0.36
SFSWAP-204ENST00000535399 OR1S1Q8NH92 325 aa17.29■□□□□ 0.36
SFSWAP-204ENST00000535399 COQ8AQ8NI60 647 aa17.29■□□□□ 0.36
SFSWAP-204ENST00000535399 TRAV6A0A075B6T7 132 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 FAM240BA0A1B0GVZ2 78 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 IGLV1-51P01701 117 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 FCGR2BP31994 310 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 ADMP35318 185 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 MFAP4P55083 255 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 FAM106AQ4KMX7 169 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 Q56UQ5 140 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 SPSB3Q6PJ21 355 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 UBAC2Q8NBM4 344 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 OR52B4Q8NGK2 314 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 TMEM170AQ8WVE7 144 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 CHRDL1Q9BU40 450 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 ZNF436Q9C0F3 470 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 RBKSQ9H477 322 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 NUDT15Q9NV35 164 aa17.28■□□□□ 0.36
SFSWAP-204ENST00000535399 IGHV3-35A0A0C4DH35 117 aa17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 CORTO00230 105 aa17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 ADAP1O75689 374 aa17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 C2orf83Q53S99 150 aa17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 UNQ9165/PRO28630Q6UXU0 137 aa17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 SLC24A4Q8NFF2 622 aa17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 MRAPQ8TCY5 172 aa17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 PRR25Q96S07 402 aa17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 TXN2Q99757 166 aa17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 FNDC4Q9H6D8 234 aaPredicted RBP17.27■□□□□ 0.36
SFSWAP-204ENST00000535399 C2orf70A6NJV1 201 aa17.26■□□□□ 0.35
SFSWAP-204ENST00000535399 CTSGP08311 255 aa17.26■□□□□ 0.35
SFSWAP-204ENST00000535399 SPNP16150 400 aa17.26■□□□□ 0.35
SFSWAP-204ENST00000535399 DTD1Q8TEA8 209 aa17.26■□□□□ 0.35
SFSWAP-204ENST00000535399 MITD1Q8WV92 249 aa17.26■□□□□ 0.35
SFSWAP-204ENST00000535399 ZNF414Q96IQ9 312 aa17.26■□□□□ 0.35
SFSWAP-204ENST00000535399 HIPK2Q9H2X6 1198 aa17.26■□□□□ 0.35
SFSWAP-204ENST00000535399 GAR1Q9NY12 217 aaKnown RBP17.26■□□□□ 0.35
SFSWAP-204ENST00000535399 ZNF256Q9Y2P7 627 aaPredicted RBP17.26■□□□□ 0.35
SFSWAP-204ENST00000535399 ZNF320A2RRD8 509 aa17.25■□□□□ 0.35
SFSWAP-204ENST00000535399 TMEM213A2RRL7 107 aa17.25■□□□□ 0.35
SFSWAP-204ENST00000535399 A8MWP6 167 aa17.25■□□□□ 0.35
SFSWAP-204ENST00000535399 H2AFB2P0C5Z0 115 aa17.25■□□□□ 0.35
SFSWAP-204ENST00000535399 EDN2P20800 178 aa17.25■□□□□ 0.35
SFSWAP-204ENST00000535399 MLANAQ16655 118 aa17.25■□□□□ 0.35
SFSWAP-204ENST00000535399 MPTX1A8MV57 137 aa17.24■□□□□ 0.35
SFSWAP-204ENST00000535399 FAM90A26D6RGX4 464 aa17.24■□□□□ 0.35
SFSWAP-204ENST00000535399 FOLR2P14207 255 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms