RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	C6orf62	Q9GZU0	229 aa	Predicted RBP	0.92	□□□□□ -2.26
RDX-215	ENST00000533961	FAM96A	Q9H5X1	160 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	XAGE1A	Q9HD64	81 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	ENY2	Q9NPA8	101 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	GPR84	Q9NQS5	396 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	C8orf4	Q9NR00	106 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	LYRM2	Q9NU23	88 aa	Predicted RBP	0.92	□□□□□ -2.26
RDX-215	ENST00000533961	C14orf105	Q9NVL8	296 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	OPTC	Q9UBM4	332 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	UFC1	Q9Y3C8	167 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	FAM32A	Q9Y421	112 aa	Known RBP	0.92	□□□□□ -2.26
RDX-215	ENST00000533961	TIMM22	Q9Y584	194 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	TMEM56-RWDD3	S4R434	201 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	GPR98	Q8WXG9	6306 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	CUL9	Q8IWT3	2517 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	DOCK5	Q9H7D0	1870 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	NYNRIN	Q9P2P1	1898 aa	Known RBP	0.92	□□□□□ -2.26
RDX-215	ENST00000533961	CEP152	O94986	1710 aa		0.92	□□□□□ -2.26
RDX-215	ENST00000533961	HECW2	Q9P2P5	1572 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	RERE	Q9P2R6	1566 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	MYH3	P11055	1940 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	ADGB	Q8N7X0	1667 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	NUP160	Q12769	1436 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	TRBV19	A0A075B6N1	114 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	FUOM	A2VDF0	154 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	GRIFIN	A4D1Z8	144 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	TRAPPC13	A5PLN9	417 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	PRORSD1P	A6NEY8	169 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961		H3BT86	120 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	C19orf84	I3L1E1	186 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	AIP	O00170	330 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	PIR	O00625	290 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	ORC5	O43913	435 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	PIAS1	O75925	651 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	IFNA14	P01570	189 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	HMGN1	P05114	100 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	C8G	P07360	202 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	LGALS1	P09382	135 aa	Known RBP	0.91	□□□□□ -2.26
RDX-215	ENST00000533961	RBP1	P09455	135 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	TFPT	P0C1Z6	253 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	SMIM10L2A	P0DMW4	78 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	SMIM10L2B	P0DMW5	78 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	G6PC	P35575	357 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	XCL1	P47992	114 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	TAS2R41	P59536	307 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	TBPL1	P62380	186 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	RHOB	P62745	196 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	DEFB115	Q30KQ5	88 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	LGALS9B	Q3B8N2	356 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	AKR1C8P	Q5T2L2	129 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	GLT8D1	Q68CQ7	371 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961		Q6ZTI0	123 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	GPHB5	Q86YW7	130 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	SMIM20	Q8N5G0	67 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	TMEM35B	Q8NCS4	154 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	NUP35	Q8NFH5	326 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	OR13C4	Q8NGS5	318 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	OR2T4	Q8NH00	348 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	SLC7A6	Q92536	515 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	KLK6	Q92876	244 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	C2orf50	Q96LR7	162 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	TMEM70	Q9BUB7	260 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	TMEM147	Q9BVK8	224 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	CHST6	Q9GZX3	395 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	PBOV1	Q9GZY1	135 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	TMEM222	Q9H0R3	208 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	BATF3	Q9NR55	127 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	ACER3	Q9NUN7	267 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	PRND	Q9UKY0	176 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	PKIG	Q9Y2B9	76 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	SLC35A3	Q9Y2D2	325 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	NDUFAF1	Q9Y375	327 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	CPD	O75976	1380 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	ABCC12	Q96J65	1359 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	MED13	Q9UHV7	2174 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	VIRMA	Q69YN4	1812 aa	Known RBP	0.91	□□□□□ -2.26
RDX-215	ENST00000533961	DOCK3	Q8IZD9	2030 aa		0.91	□□□□□ -2.26
RDX-215	ENST00000533961	RALGAPA2	Q2PPJ7	1873 aa		0.9	□□□□□ -2.26
RDX-215	ENST00000533961	FMN1	Q68DA7	1419 aa		0.9	□□□□□ -2.26
RDX-215	ENST00000533961	MIA2	Q96PC5	1412 aa		0.9	□□□□□ -2.26
RDX-215	ENST00000533961	SETD5	Q9C0A6	1442 aa		0.9	□□□□□ -2.26
RDX-215	ENST00000533961	KIF13B	Q9NQT8	1826 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961		A0A087WUU8	490 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	TRAV38-1	A0A0B4J264	116 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	TRAV41	A0A0B4J266	112 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	TRAV4	A0A0B4J268	109 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961		A0A0J9YY10	115 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961		A0A1B0GX78	115 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	TSTD3	H0UI37	97 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961		I3L521	148 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961		J3QRK9	145 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	KPNA4	O00629	521 aa	Predicted RBP	0.9	□□□□□ -2.27
RDX-215	ENST00000533961	MFSD11	O43934	449 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	PFDN1	O60925	122 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	ZNF737	O75373	536 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	IFNA10	P01566	189 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	C1QA	P02745	245 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	PPBP	P02775	128 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	SERPINA7	P05543	415 aa		0.9	□□□□□ -2.27
RDX-215	ENST00000533961	CRH	P06850	196 aa		0.9	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms