RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 C4BPBP20851 252 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 CBLN1P23435 193 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 S100GP29377 79 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 SRPXP78539 464 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 TMEM187Q14656 261 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 TMEM177Q53S58 311 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 OR4A47Q6IF82 309 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 GSG1LQ6UXU4 331 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 GPHB5Q86YW7 130 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 CMTM1Q8IZ96 169 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 KIR2DL5AQ8N109 375 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 C9orf62Q8N4C0 152 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 SRSF12Q8WXF0 261 aaKnown RBP9.26□□□□□ -0.93
CAPN1-223ENST00000533079 OR1A1Q9P1Q5 309 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 TRAV25A0A0B4J276 109 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 SMLR1H3BR10 107 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 M0R1X1 148 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 SIX6O95475 246 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 RRASP10301 218 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 PI3P19957 117 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 IL15RAQ13261 267 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 TNXAQ16473 311 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 RTL8BQ17RB0 113 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 DEFB135Q30KP9 77 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 VMA21Q3ZAQ7 101 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 TEX45Q8NA69 505 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 RNF183Q96D59 192 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 C2orf50Q96LR7 162 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 TMEM56Q96MV1 263 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 SPIN2AQ99865 258 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 SPIN2BQ9BPZ2 258 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 SLC5A7Q9GZV3 580 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 MFFQ9GZY8 342 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 TMEM56-RWDD3S4R434 201 aa9.25□□□□□ -0.93
CAPN1-223ENST00000533079 DUXBA0A1W2PPF3 345 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 SHOXO15266 292 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 IFNA21P01568 189 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 APELAP0DMC3 54 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 FXYD4P59646 89 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 UBE2KP61086 200 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 C15orf32Q32M92 178 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 LGALSLQ3ZCW2 172 aaPredicted RBP9.24□□□□□ -0.93
CAPN1-223ENST00000533079 TM4SF20Q53R12 229 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 Q5BKY6 102 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 LGI3Q8N145 548 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 OR1L6Q8NGR2 347 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 GLYATL2Q8WU03 294 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 IL22RA2Q969J5 263 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 MARC2Q969Z3 335 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 TMEM222Q9H0R3 208 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 FAM212BQ9NTI7 297 aaPredicted RBP9.24□□□□□ -0.93
CAPN1-223ENST00000533079 RDH8Q9NYR8 311 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 COMMD9Q9P000 198 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 MLXQ9UH92 298 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 TMED3Q9Y3Q3 217 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 DMRT1Q9Y5R6 373 aa9.24□□□□□ -0.93
CAPN1-223ENST00000533079 PKHD1P08F94 4074 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 IGKV1D-13A0A0B4J2D9 117 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 C3orf85A0A1B0GTC6 90 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 TMEM213A2RRL7 107 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 PPP5D1E7EU14 171 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 PGLYRP1O75594 196 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-223ENST00000533079 CDS2O95674 445 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 IGKV1-13P0DP09 117 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 RPA2P15927 270 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 EDN2P20800 178 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 UCP1P25874 307 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 PSMB6P28072 239 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 LINC00205P59089 165 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 IFITM2Q01629 132 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 PRSS8Q16651 343 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 MRGPRG-AS1Q2M3A8 158 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 FAM106AQ4KMX7 169 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 ZNF818PQ6ZRF7 136 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 TTC9CQ8N5M4 171 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 STPG3Q8N7X2 389 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 CACNG8Q8WXS5 425 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 PDCD10Q9BUL8 212 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 ZNF257Q9Y2Q1 563 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 HSPB11Q9Y547 144 aa9.23□□□□□ -0.93
CAPN1-223ENST00000533079 C5orf51A6NDU8 294 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 ACTL6BO94805 426 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 SCAF4O95104 1147 aaKnown RBP9.22□□□□□ -0.93
CAPN1-223ENST00000533079 PRH1P02810 166 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 OR5AC1P0C628 307 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 F2RP25116 425 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 PHLDA2Q53GA4 152 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 RBPMS2Q6ZRY4 209 aaKnown RBP9.22□□□□□ -0.93
CAPN1-223ENST00000533079 TBC1D26Q86UD7 250 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 OR2C3Q8N628 320 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 OSR1Q8TAX0 266 aaPredicted RBP9.22□□□□□ -0.93
CAPN1-223ENST00000533079 PPP1R1CQ8WVI7 109 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 SECTM1Q8WVN6 248 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 SPAG8Q99932 426 aaPredicted RBP9.22□□□□□ -0.93
CAPN1-223ENST00000533079 OR2D2Q9H210 308 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 CCL28Q9NRJ3 127 aa9.22□□□□□ -0.93
CAPN1-223ENST00000533079 PAIP2BQ9ULR5 123 aaKnown RBP9.22□□□□□ -0.93
CAPN1-223ENST00000533079 TRAV14DV4A0A0A6YYC5 116 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms