RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 ZIC4Q8N9L1 334 aa6.79□□□□□ -1.32
CTNND1-220ENST00000529526 NBR2O15453 112 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 PYYP10082 97 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 HTN3P15516 51 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 FOXF2Q12947 444 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 LY6DQ14210 128 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 RNASEH2CQ8TDP1 164 aaKnown RBP6.78□□□□□ -1.32
CTNND1-220ENST00000529526 TMEM101Q96IK0 257 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 SPAG8Q99932 426 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-220ENST00000529526 SDF2L1Q9HCN8 221 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 SOX21Q9Y651 276 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-220ENST00000529526 LCTP09848 1927 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 IGKV3D-20A0A0C4DH25 116 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 KIR3DL3Q8N743 410 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 LRTM2Q8N967 370 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 A0A0G2JMZ2 1700 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 LRRC37A2A6NM11 1700 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 SPTBP11277 2137 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 A0A1B0GUT8 65 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 HIGD1CA8MV81 97 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 J3QRE1 110 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 FOXG1P55316 489 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-220ENST00000529526 FAM90A1Q86YD7 464 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 FER1L6-AS1Q8NA97 138 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 WFDC1Q9HC57 220 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 YAE1D1Q9NRH1 226 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 LOC102723996A0A087X1L8 192 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 A0A0G2JLM5 398 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 C15orf61A6NNL5 157 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 OR11H12B2RN74 326 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 C1QTNF9P0C862 333 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 PAQR4Q8N4S7 273 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-220ENST00000529526 OR11H1Q8NG94 326 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 OR11H2Q8NH07 326 aa6.78□□□□□ -1.32
CTNND1-220ENST00000529526 IZUMO1RA6ND01 250 aa6.77□□□□□ -1.32
CTNND1-220ENST00000529526 ADMP35318 185 aa6.77□□□□□ -1.32
CTNND1-220ENST00000529526 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.32
CTNND1-220ENST00000529526 PMCHL2Q9BQD1 86 aa6.77□□□□□ -1.32
CTNND1-220ENST00000529526 MRPL16Q9NX20 251 aaKnown RBP6.77□□□□□ -1.32
CTNND1-220ENST00000529526 YPEL1O60688 119 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
CTNND1-220ENST00000529526 LY6G6FQ5SQ64 297 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 ZNF324BQ6AW86 544 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-220ENST00000529526 YPEL2Q96QA6 119 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 VSIRQ9H7M9 311 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 A8MXK9 166 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 SRD5A1P18405 259 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 LEPP41159 167 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 PCP4P48539 62 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 CYB5R2Q6BCY4 276 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 PGPEP1LA6NFU8 196 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 EFNA2O43921 213 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 NUDT10Q8NFP7 164 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 OR4X2Q8NGF9 303 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 RNASE6Q93091 150 aaKnown RBP6.77□□□□□ -1.33
CTNND1-220ENST00000529526 NUDT11Q96G61 164 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 TMEM133Q9H2Q1 129 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 TOMM7Q9P0U1 55 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 LINC00527Q9UJ94 153 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 GREB1Q4ZG55 1949 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-220ENST00000529526 CCL1P22362 96 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 PPIFP30405 207 aaKnown RBP6.77□□□□□ -1.33
CTNND1-220ENST00000529526 PRR31Q5SQ13 230 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 GFI1BQ5VTD9 330 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 OR10W1Q8NGF6 305 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 COPS9Q8WXC6 57 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 DOCK4Q8N1I0 1966 aa6.77□□□□□ -1.33
CTNND1-220ENST00000529526 VDAC2P45880 294 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-220ENST00000529526 ZFP36L1Q07352 338 aaKnown RBP6.76□□□□□ -1.33
CTNND1-220ENST00000529526 GTF3AQ92664 365 aaKnown RBP6.76□□□□□ -1.33
CTNND1-220ENST00000529526 ALKBH7Q9BT30 221 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-220ENST00000529526 H0YIZ8 118 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 THBDP07204 575 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 C11orf44Q8N8P7 122 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 CACNG8Q8WXS5 425 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 OTORQ9NRC9 128 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 WDR90Q96KV7 1748 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 CD7P09564 240 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 MST1P26927 711 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 FBLN7Q53RD9 439 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 IGKV1-12A0A0C4DH73 117 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 H7C1H1 209 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 IGKV1D-12P01611 117 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 IGHV1-46P01743 117 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 C2orf88Q9BSF0 95 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 IGLV3-32A0A0A0MS00 114 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 TRAV5A0A0B4J249 113 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 LINC00271P0C7V0 271 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 TMEM144Q7Z5S9 345 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 C1QL4Q86Z23 238 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 KLHDC3Q9BQ90 382 aa6.76□□□□□ -1.33
CTNND1-220ENST00000529526 TRGV2A0A075B6R0 118 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 TIMM23O14925 209 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 SERF1AO75920 110 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 SELLP14151 372 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 CCL20P78556 96 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 PAPPA-AS1Q5QFB9 102 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 C5orf24Q7Z6I8 188 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 CRIPAKQ8N1N5 446 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms