RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 ADMP35318 185 aa13.13□□□□□ -0.31
USP35-202ENST00000528910 HOXA1P49639 335 aaPredicted RBP13.13□□□□□ -0.31
USP35-202ENST00000528910 ELLP55199 621 aaPredicted RBP13.13□□□□□ -0.31
USP35-202ENST00000528910 SPCS3P61009 180 aa13.13□□□□□ -0.31
USP35-202ENST00000528910 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
USP35-202ENST00000528910 NMSQ5H8A3 153 aa13.13□□□□□ -0.31
USP35-202ENST00000528910 TRIQKQ629K1 86 aa13.13□□□□□ -0.31
USP35-202ENST00000528910 ZNF57Q68EA5 555 aaPredicted RBP13.13□□□□□ -0.31
USP35-202ENST00000528910 MISP3Q96FF7 219 aa13.13□□□□□ -0.31
USP35-202ENST00000528910 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.13□□□□□ -0.31
USP35-202ENST00000528910 GAR1Q9NY12 217 aaKnown RBP13.13□□□□□ -0.31
USP35-202ENST00000528910 PRR13Q9NZ81 148 aa13.13□□□□□ -0.31
USP35-202ENST00000528910 SHPKQ9UHJ6 478 aa13.13□□□□□ -0.31
USP35-202ENST00000528910 COL7A1Q02388 2944 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 IGHV3-21A0A0B4J1V1 117 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 NAP1L6A6NFF2 107 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 CORTO00230 105 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 MT-CO2P00403 227 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 ANXA3P12429 323 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 RBMS2Q15434 407 aaKnown RBP13.12□□□□□ -0.31
USP35-202ENST00000528910 TMEM128Q5BJH2 165 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 LGI3Q8N145 548 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 Q8N1Y9 231 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 DYNLRB2Q8TF09 96 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 ZNF414Q96IQ9 312 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 TXN2Q99757 166 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 CHRDL1Q9BU40 450 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 PALMDQ9NP74 551 aa13.12□□□□□ -0.31
USP35-202ENST00000528910 TECRQ9NZ01 308 aaKnown RBP13.12□□□□□ -0.31
USP35-202ENST00000528910 PIGBOS1A0A0B4J2F0 54 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 DUXBA0A1W2PPF3 345 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 ZNF320A2RRD8 509 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 C8orf88P0DMB2 117 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 CBLN1P23435 193 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 SNCAP37840 140 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 DEFB114Q30KQ6 69 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 CD300EQ496F6 205 aaPredicted RBP13.11□□□□□ -0.31
USP35-202ENST00000528910 Q56UQ5 140 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 CACNG8Q8WXS5 425 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 MARC2Q969Z3 335 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 ENY2Q9NPA8 101 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 CACFD1Q9UGQ2 172 aa13.11□□□□□ -0.31
USP35-202ENST00000528910 A8MZ25 164 aa13.1□□□□□ -0.31
USP35-202ENST00000528910 NDUFA4O00483 81 aa13.1□□□□□ -0.31
USP35-202ENST00000528910 CTSGP08311 255 aa13.1□□□□□ -0.31
USP35-202ENST00000528910 SULT1A3P0DMM9 295 aa13.1□□□□□ -0.31
USP35-202ENST00000528910 SULT1A4P0DMN0 295 aa13.1□□□□□ -0.31
USP35-202ENST00000528910 MFAP4P55083 255 aa13.1□□□□□ -0.31
USP35-202ENST00000528910 LRTM2Q8N967 370 aa13.1□□□□□ -0.31
USP35-202ENST00000528910 UBAC2Q8NBM4 344 aa13.1□□□□□ -0.31
USP35-202ENST00000528910 UFC1Q9Y3C8 167 aa13.1□□□□□ -0.31
USP35-202ENST00000528910 IGHV3-35A0A0C4DH35 117 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 NDUFB6O95139 128 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 IL7P13232 177 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 BTCP35070 178 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 INPP1P49441 399 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 CCR6P51684 374 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 SUB1P53999 127 aaKnown RBP eCLIP13.09□□□□□ -0.31
USP35-202ENST00000528910 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
USP35-202ENST00000528910 TM4SF20Q53R12 229 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 C11orf87Q6NUJ2 197 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 LINC00299Q6ZSB3 139 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 LYZL2Q7Z4W2 148 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 CENPSQ8N2Z9 138 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 PINX1Q96BK5 328 aaKnown RBP13.09□□□□□ -0.31
USP35-202ENST00000528910 C7orf50Q9BRJ6 194 aaKnown RBP13.09□□□□□ -0.31
USP35-202ENST00000528910 DAZ1Q9NQZ3 744 aaKnown RBP13.09□□□□□ -0.31
USP35-202ENST00000528910 MLXQ9UH92 298 aa13.09□□□□□ -0.31
USP35-202ENST00000528910 NUPL2O15504 423 aaKnown RBP13.08□□□□□ -0.32
USP35-202ENST00000528910 NHLRC4P0CG21 123 aaPredicted RBP13.08□□□□□ -0.32
USP35-202ENST00000528910 HTR2BP41595 481 aa13.08□□□□□ -0.32
USP35-202ENST00000528910 RELQ04864 619 aaPredicted RBP13.08□□□□□ -0.32
USP35-202ENST00000528910 PPP1R1AQ13522 171 aa13.08□□□□□ -0.32
USP35-202ENST00000528910 SMCO1Q147U7 214 aa13.08□□□□□ -0.32
USP35-202ENST00000528910 UXS1Q8NBZ7 420 aa13.08□□□□□ -0.32
USP35-202ENST00000528910 MRPL27Q9P0M9 148 aaKnown RBP13.08□□□□□ -0.32
USP35-202ENST00000528910 HSPB7Q9UBY9 170 aa13.08□□□□□ -0.32
USP35-202ENST00000528910 ZNF785A8K8V0 405 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 SFT2D2O95562 160 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 FRMD6-AS1P0C7T7 363 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 IGHV4-30-4P0DP06 118 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 VAMP1P23763 118 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 ANKRD55Q3KP44 614 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 C2orf83Q53S99 150 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 GTSCR1Q86UQ5 136 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 TMEM61Q8N0U2 210 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 SLC24A4Q8NFF2 622 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 FNDC4Q9H6D8 234 aaPredicted RBP13.07□□□□□ -0.32
USP35-202ENST00000528910 C19orf73Q9NVV2 129 aa13.07□□□□□ -0.32
USP35-202ENST00000528910 A0A1B0GU03 582 aa13.06□□□□□ -0.32
USP35-202ENST00000528910 A6NHS1 94 aa13.06□□□□□ -0.32
USP35-202ENST00000528910 C15orf62A8K5M9 175 aa13.06□□□□□ -0.32
USP35-202ENST00000528910 K7EMT4 169 aa13.06□□□□□ -0.32
USP35-202ENST00000528910 GNG7O60262 68 aa13.06□□□□□ -0.32
USP35-202ENST00000528910 IGHV3-48P01763 117 aa13.06□□□□□ -0.32
USP35-202ENST00000528910 SLC25A6P12236 298 aa13.06□□□□□ -0.32
USP35-202ENST00000528910 NPBWR1P48145 328 aa13.06□□□□□ -0.32
USP35-202ENST00000528910 TNFRSF9Q07011 255 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms