RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 SETXQ7Z333 2677 aaKnown RBP6.06□□□□□ -1.44
SORL1-207ENST00000528339 CORTO00230 105 aa6.06□□□□□ -1.44
SORL1-207ENST00000528339 SULT1A2P50226 295 aa6.06□□□□□ -1.44
SORL1-207ENST00000528339 YPEL3P61236 119 aaPredicted RBP6.06□□□□□ -1.44
SORL1-207ENST00000528339 BLCAPP62952 87 aa6.06□□□□□ -1.44
SORL1-207ENST00000528339 SPSB3Q6PJ21 355 aa6.06□□□□□ -1.44
SORL1-207ENST00000528339 BTNL8Q6UX41 500 aa6.06□□□□□ -1.44
SORL1-207ENST00000528339 MBD3L1Q8WWY6 194 aa6.06□□□□□ -1.44
SORL1-207ENST00000528339 ZNF503Q96F45 646 aa6.06□□□□□ -1.44
SORL1-207ENST00000528339 PSENENQ9NZ42 101 aa6.06□□□□□ -1.44
SORL1-207ENST00000528339 AKAP6Q13023 2319 aa6.06□□□□□ -1.44
SORL1-207ENST00000528339 LINC00862A6NCI5 91 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 A8MWP6 167 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 ADMP35318 185 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 ERVK-16P61578 105 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 C10orf91Q5T1B1 145 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 PITPNC1Q9UKF7 332 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 ITGB1BP2Q9UKP3 347 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 HIST1H1BP16401 226 aaKnown RBP6.05□□□□□ -1.44
SORL1-207ENST00000528339 CD24P25063 80 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 NKX2-5P52952 324 aaPredicted RBP6.05□□□□□ -1.44
SORL1-207ENST00000528339 RPS16P62249 146 aaKnown RBP6.05□□□□□ -1.44
SORL1-207ENST00000528339 PATE2Q6UY27 113 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 ZNF491Q8N8L2 437 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 OR4A16Q8NH70 328 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 ST8SIA2Q92186 375 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 FAM167A-AS1Q96KT0 104 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 CTSGP08311 255 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 NPY1RP25929 384 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 FXYD3Q14802 87 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 C19orf35Q6ZS72 473 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 NPCDR1Q9BY65 106 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 DNHD1Q96M86 4753 aa6.05□□□□□ -1.44
SORL1-207ENST00000528339 MMDQ15546 238 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 PXDC1Q5TGL8 231 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 REC114Q7Z4M0 266 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 TMEM147Q9BVK8 224 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 SLC25A31Q9H0C2 315 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 MAP1AP78559 2803 aaPredicted RBP6.04□□□□□ -1.44
SORL1-207ENST00000528339 HECTD1Q9ULT8 2610 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 DNAH9Q9NYC9 4486 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 RLN2P04090 185 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 OR5G3P0C626 314 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 RPL7L1Q6DKI1 246 aaKnown RBP6.04□□□□□ -1.44
SORL1-207ENST00000528339 DCUN1D4Q92564 292 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 MFFQ9GZY8 342 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 MAGT1Q9H0U3 335 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 ARL2-SNX15V9GYD0 113 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 C5orf51A6NDU8 294 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 JTBO76095 146 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 NMBP08949 121 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 FOXL1Q12952 345 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 CLLU1Q5K131 121 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 ZNF680Q8NEM1 530 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 TAF15Q92804 592 aaKnown RBP eCLIP6.04□□□□□ -1.44
SORL1-207ENST00000528339 SIGLEC8Q9NYZ4 499 aa6.04□□□□□ -1.44
SORL1-207ENST00000528339 A8MTW9 85 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 LGALS9O00182 355 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 TOMM40O96008 361 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 LGALS4P56470 323 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 KRTAP21-3Q3LHN1 58 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 ACSM6Q6P461 480 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 COMMD1Q8N668 190 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 THAP6Q8TBB0 222 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 CITED1Q99966 193 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 PLEKHA3Q9HB20 300 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 STRAPQ9Y3F4 350 aaKnown RBP6.03□□□□□ -1.44
SORL1-207ENST00000528339 TENM1Q9UKZ4 2725 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 C13orf42A0A1B0GVH6 325 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 CAMLGP49069 296 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 AKR1C2P52895 323 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 SERF2P84101 59 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 FAM90A2PQ658T7 463 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 ADAMTSL5Q6ZMM2 481 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 PRIMA1Q86XR5 153 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 TMEM219Q86XT9 240 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 CCDC28AQ8IWP9 274 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 TMEM190Q8WZ59 177 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 PINX1Q96BK5 328 aaKnown RBP6.03□□□□□ -1.44
SORL1-207ENST00000528339 SLC35E1Q96K37 410 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 HUWE1Q7Z6Z7 4374 aaKnown RBP6.03□□□□□ -1.44
SORL1-207ENST00000528339 IGHV3OR16-10A0A075B7F0 116 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 A0A087X0K7 114 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 TRAV41A0A0B4J266 112 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 TCRBV4S1A1TA0A5B7 111 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 SOCS3O14543 225 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 PLXNB1O43157 2135 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 CLN5O75503 358 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 NDUFB8O95169 186 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 ELANEP08246 267 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 RPL23AP62750 156 aaKnown RBP6.03□□□□□ -1.44
SORL1-207ENST00000528339 SLC38A11Q08AI6 406 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 TMEM267Q0VDI3 215 aaPredicted RBP6.03□□□□□ -1.44
SORL1-207ENST00000528339 SLC16A13Q7RTY0 426 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 PDZD9Q8IXQ8 264 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 NECAP1Q8NC96 275 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 OR5C1Q8NGR4 320 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 BOLA1Q9Y3E2 137 aa6.03□□□□□ -1.44
SORL1-207ENST00000528339 TRBV7-1A0A0A6YYK4 115 aa6.02□□□□□ -1.45
SORL1-207ENST00000528339 ARPC5O15511 151 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms