RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SFT2D2O95562 160 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 VAMP1P23763 118 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 CCR6P51684 374 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 NKX2-5P52952 324 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-225ENST00000523950 KLF5Q13887 457 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-225ENST00000523950 IZUMO4Q1ZYL8 232 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 RPEL1Q2QD12 228 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 SLC25A24Q6NUK1 477 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 ACSM6Q6P461 480 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 GPR146Q96CH1 333 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 ELOVL1Q9BW60 279 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 GPN1Q9HCN4 374 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-225ENST00000523950 ENY2Q9NPA8 101 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 NUDT15Q9NV35 164 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 CACNG5Q9UF02 275 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 DMRT1Q9Y5R6 373 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 NBEAL1Q6ZS30 2694 aa9.64□□□□□ -0.87
VEGFA-225ENST00000523950 SNRPGP15A8MWD9 76 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 CORTO00230 105 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 BMPR1BO00238 502 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 GGCTO75223 188 aaKnown RBP9.63□□□□□ -0.87
VEGFA-225ENST00000523950 TRBV12-3P01733 135 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 IL5P05113 134 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 SULT1A3P0DMM9 295 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 SULT1A4P0DMN0 295 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 SUB1P53999 127 aaKnown RBP eCLIP9.63□□□□□ -0.87
VEGFA-225ENST00000523950 SPCS3P61009 180 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 NMSQ5H8A3 153 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 Q6ZRM9 215 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 CCDC140Q96MF4 163 aa9.63□□□□□ -0.87
VEGFA-225ENST00000523950 GAR1Q9NY12 217 aaKnown RBP9.63□□□□□ -0.87
VEGFA-225ENST00000523950 MFSD2BA6NFX1 497 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 ARL3P36405 182 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 SNCAP37840 140 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 HOXA1P49639 335 aaPredicted RBP9.62□□□□□ -0.87
VEGFA-225ENST00000523950 PPP1R1AQ13522 171 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 SMCO1Q147U7 214 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 LYZL2Q7Z4W2 148 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 OR9G4Q8NGQ1 327 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 ZNF502Q8TBZ5 544 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 OR4C12Q96R67 309 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 SIGLEC8Q9NYZ4 499 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 PEMTQ9UBM1 199 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 TMED3Q9Y3Q3 217 aa9.62□□□□□ -0.87
VEGFA-225ENST00000523950 A0A1B0GU03 582 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 LGALS9O00182 355 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 SAP30O75446 220 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 SLC25A6P12236 298 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 FCGR2BP31994 310 aaPredicted RBP9.61□□□□□ -0.87
VEGFA-225ENST00000523950 MFAP2P55001 183 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 SYNJ2BPP57105 145 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 PVRIGQ6DKI7 326 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 CLEC19AQ6UXS0 136 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 GPHB5Q86YW7 130 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 C20orf85Q9H1P6 137 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 AURKAIP1Q9NWT8 199 aaPredicted RBP9.61□□□□□ -0.87
VEGFA-225ENST00000523950 C21orf62Q9NYP8 219 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 PRR13Q9NZ81 148 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 NOTCH3Q9UM47 2321 aa9.61□□□□□ -0.87
VEGFA-225ENST00000523950 C9orf170A2RU37 121 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 PPP5D1E7EU14 171 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 K7EIM0 57 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 HLA-AP01891 365 aaKnown RBP9.6□□□□□ -0.87
VEGFA-225ENST00000523950 CLEC3BP05452 202 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 OR4E1P0C645 316 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 GPR183P32249 361 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 HTR2BP41595 481 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 BSXQ3C1V8 233 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 ANKRD55Q3KP44 614 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 SPINK9Q5DT21 86 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 SPSB3Q6PJ21 355 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 COQ8AQ8NI60 647 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 SCARB1Q8WTV0 552 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 BSCL2Q96G97 398 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-225ENST00000523950 TXN2Q99757 166 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 HSPB7Q9UBY9 170 aa9.6□□□□□ -0.87
VEGFA-225ENST00000523950 FAM90A26D6RGX4 464 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 I3L2K1 104 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 TGOLN2O43493 480 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 IGHV3-23P01764 117 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 RNASE2P10153 161 aaKnown RBP9.59□□□□□ -0.87
VEGFA-225ENST00000523950 MFAP4P55083 255 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 KRTAP10-11P60412 298 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 TNFRSF9Q07011 255 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 FCN2Q15485 313 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 FAM106AQ4KMX7 169 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 LYG2Q86SG7 212 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 C9orf62Q8N4C0 152 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 ZNF431Q8TF32 576 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-225ENST00000523950 MISP3Q96FF7 219 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 HIPK2Q9H2X6 1198 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 FLVCR2Q9UPI3 526 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 S4R3C0 116 aa9.59□□□□□ -0.87
VEGFA-225ENST00000523950 DNAH3Q8TD57 4116 aa9.58□□□□□ -0.88
VEGFA-225ENST00000523950 TRAV6A0A075B6T7 132 aa9.58□□□□□ -0.88
VEGFA-225ENST00000523950 CEBPZOSA8MTT3 80 aa9.58□□□□□ -0.88
VEGFA-225ENST00000523950 A8MWP6 167 aa9.58□□□□□ -0.88
VEGFA-225ENST00000523950 SSNA1O43805 119 aa9.58□□□□□ -0.88
VEGFA-225ENST00000523950 PITX3O75364 302 aa9.58□□□□□ -0.88
VEGFA-225ENST00000523950 OR2C1O95371 312 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms