RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 CD24P25063 80 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 F2RP25116 425 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 RPL12P30050 165 aaKnown RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 S100A11P31949 105 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 KCNJ3P48549 501 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 DYNLT3P51808 116 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 ARHGDIBP52566 201 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 KRTAP10-9P60411 292 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 ERVK-16P61578 105 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 RPL31P62899 125 aaKnown RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 LCN2P80188 198 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 MRPS11P82912 194 aaKnown RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 RUNX1Q01196 453 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 DEFA5Q01523 94 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 AKR1C1Q04828 323 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 TFF3Q07654 80 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 SURF2Q15527 256 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 MORN2Q502X0 79 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 AKIRIN2Q53H80 203 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 LRRC10Q5BKY1 277 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 SPANXN5Q5MJ07 72 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 MUC21Q5SSG8 566 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 C10orf55Q5SWW7 151 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 WDR25Q64LD2 544 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 OR8G2PQ6IF36 304 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 ZNF343Q6P1L6 599 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 FAHD2BQ6P2I3 314 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 PRSS54Q6PEW0 395 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 ADAMTSL5Q6ZMM2 481 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 C19orf35Q6ZS72 473 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 ERASQ7Z444 233 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 MOB3BQ86TA1 216 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 CMTM1Q8IZ96 169 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 Q8N377 158 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 ZNF561Q8N587 486 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 KCNRGQ8N5I3 272 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 ZNF525Q8N782 197 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 ZNF645Q8N7E2 425 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 INO80EQ8NBZ0 244 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 MAPK1IP1LQ8NDC0 245 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 OR4F17Q8NGA8 305 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 OR4D5Q8NGN0 318 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 OR10Z1Q8NGY1 313 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 RBPMSQ93062 196 aaKnown RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 FAHD2AQ96GK7 314 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 OR4C12Q96R67 309 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 OR4F4Q96R69 305 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 SPAG8Q99932 426 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 TMEM222Q9H0R3 208 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 ALX4Q9H161 411 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 IFI27L2Q9H2X8 130 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 RBKSQ9H477 322 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 MYOZ1Q9NP98 299 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 IDI2-AS1Q9NZ38 188 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 NUP50Q9UKX7 468 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 SOX21Q9Y651 276 aaPredicted RBP2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 TNCP24821 2201 aa2.1□□□□□ -2.07
CKS1BP7-201ENST00000522230 POLQO75417 2590 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 ATMQ13315 3056 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 TET2Q6N021 2002 aaPredicted RBP2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 IGHV3-21A0A0B4J1V1 117 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 A0A0D9SG52 128 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 A0A0J9YWU9 116 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 UBE2L5PA0A1B0GUS4 154 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 A0A1B0GWJ7 208 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 hADV38S2A0JD32 116 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 RPL37AP8A6NKH3 93 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 ZNF729A6NN14 1252 aaPredicted RBP2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 RNF212BA8MTL3 300 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 ZNF705EA8MWA4 302 aaPredicted RBP2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 I3L521 148 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 TOR1AO14656 332 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 HMGB3O15347 200 aaKnown RBP2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 CHST1O43916 411 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 DEDDO75618 318 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 IFNA7P01567 189 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 IFNA17P01571 189 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 IGHV3-48P01763 117 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 REG1AP05451 166 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 CD55P08174 381 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 PRB4P10163 310 aaPredicted RBP2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 SLC25A4P12235 298 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 DEFA4P12838 97 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 TUBG1P23258 451 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 UCP1P25874 307 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 CNTFRP26992 372 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 GPR6P46095 362 aaPredicted RBP2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 CEBPGP53567 150 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 TMEM33P57088 247 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 RAB14P61106 215 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 RND3P61587 244 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 ARF6P62330 175 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 GNB2P62879 340 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 UBA52P62987 128 aaKnown RBP2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 SRPXP78539 464 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 EWSR1Q01844 656 aaKnown RBP eCLIP2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 PAX8Q06710 450 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 FGL1Q08830 312 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 ZNF616Q08AN1 781 aa2.09□□□□□ -2.07
CKS1BP7-201ENST00000522230 CATR1Q13166 79 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms