RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 DUX3Q96PT4 197 aa13.96□□□□□ -0.17
VEGFA-222ENST00000520948 RBKSQ9H477 322 aa13.96□□□□□ -0.17
VEGFA-222ENST00000520948 SNRPGP15A8MWD9 76 aa13.95□□□□□ -0.18
VEGFA-222ENST00000520948 NXPH3O95157 252 aa13.95□□□□□ -0.18
VEGFA-222ENST00000520948 IFNA21P01568 189 aa13.95□□□□□ -0.18
VEGFA-222ENST00000520948 HSPB1P04792 205 aaKnown RBP13.95□□□□□ -0.18
VEGFA-222ENST00000520948 HOXA1P49639 335 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-222ENST00000520948 ID3Q02535 119 aa13.95□□□□□ -0.18
VEGFA-222ENST00000520948 LINC00482Q8N8I6 264 aa13.95□□□□□ -0.18
VEGFA-222ENST00000520948 OR4D5Q8NGN0 318 aa13.95□□□□□ -0.18
VEGFA-222ENST00000520948 GPN1Q9HCN4 374 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-222ENST00000520948 THYN1Q9P016 225 aa13.95□□□□□ -0.18
VEGFA-222ENST00000520948 DNAH9Q9NYC9 4486 aa13.94□□□□□ -0.18
VEGFA-222ENST00000520948 IGHV4OR15-8A0A075B7B6 117 aa13.94□□□□□ -0.18
VEGFA-222ENST00000520948 A0A087WW49 117 aa13.94□□□□□ -0.18
VEGFA-222ENST00000520948 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.94□□□□□ -0.18
VEGFA-222ENST00000520948 CEBPZOSA8MTT3 80 aa13.94□□□□□ -0.18
VEGFA-222ENST00000520948 CYB5BO43169 146 aa13.94□□□□□ -0.18
VEGFA-222ENST00000520948 CD69Q07108 199 aa13.94□□□□□ -0.18
VEGFA-222ENST00000520948 ZNF616Q08AN1 781 aa13.94□□□□□ -0.18
VEGFA-222ENST00000520948 VN1R17PQ8TDU5 208 aa13.94□□□□□ -0.18
VEGFA-222ENST00000520948 ENY2Q9NPA8 101 aa13.94□□□□□ -0.18
VEGFA-222ENST00000520948 MFSD2BA6NFX1 497 aa13.93□□□□□ -0.18
VEGFA-222ENST00000520948 I3L2K1 104 aa13.93□□□□□ -0.18
VEGFA-222ENST00000520948 K7EIM0 57 aa13.93□□□□□ -0.18
VEGFA-222ENST00000520948 TRBV12-3P01733 135 aa13.93□□□□□ -0.18
VEGFA-222ENST00000520948 SNCAP37840 140 aa13.93□□□□□ -0.18
VEGFA-222ENST00000520948 EXOSC2Q13868 293 aaKnown RBP13.93□□□□□ -0.18
VEGFA-222ENST00000520948 DTD1Q8TEA8 209 aa13.93□□□□□ -0.18
VEGFA-222ENST00000520948 CXorf58Q96LI9 332 aa13.93□□□□□ -0.18
VEGFA-222ENST00000520948 CCDC140Q96MF4 163 aa13.93□□□□□ -0.18
VEGFA-222ENST00000520948 RANGRFQ9HD47 186 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-222ENST00000520948 HEYLQ9NQ87 328 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-222ENST00000520948 PEF1Q9UBV8 284 aaKnown RBP13.93□□□□□ -0.18
VEGFA-222ENST00000520948 RYR3Q15413 4870 aa13.93□□□□□ -0.18
VEGFA-222ENST00000520948 TRBV7-1A0A0A6YYK4 115 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 ANKRD34BA5PLL1 514 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 LINC01619G3V211 115 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 HTR2BP41595 481 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 SUB1P53999 127 aaKnown RBP eCLIP13.92□□□□□ -0.18
VEGFA-222ENST00000520948 EGFEM1PQ0D2K5 195 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 C2orf83Q53S99 150 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 FAM209BQ5JX69 171 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 ZBTB8BQ8NAP8 495 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-222ENST00000520948 UXS1Q8NBZ7 420 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 ZNF502Q8TBZ5 544 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 TMEM170AQ8WVE7 144 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 DPF1Q92782 380 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 HIPK2Q9H2X6 1198 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 S4R3C0 116 aa13.92□□□□□ -0.18
VEGFA-222ENST00000520948 C7orf66A4D0T2 115 aa13.91□□□□□ -0.18
VEGFA-222ENST00000520948 CCSO14618 274 aa13.91□□□□□ -0.18
VEGFA-222ENST00000520948 SYNGR2O43760 224 aa13.91□□□□□ -0.18
VEGFA-222ENST00000520948 OR8U8P0C7N1 319 aa13.91□□□□□ -0.18
VEGFA-222ENST00000520948 IL15RAQ13261 267 aa13.91□□□□□ -0.18
VEGFA-222ENST00000520948 IAH1Q2TAA2 248 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-222ENST00000520948 SCARB1Q8WTV0 552 aa13.91□□□□□ -0.18
VEGFA-222ENST00000520948 EEF1AKMT3Q96AZ1 226 aa13.91□□□□□ -0.18
VEGFA-222ENST00000520948 ATP6V0BQ99437 205 aa13.91□□□□□ -0.18
VEGFA-222ENST00000520948 U3KQ87 197 aa13.91□□□□□ -0.18
VEGFA-222ENST00000520948 F8W735 103 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-222ENST00000520948 MED6O75586 246 aa13.9□□□□□ -0.18
VEGFA-222ENST00000520948 NKX2-1P43699 371 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-222ENST00000520948 B9D2Q9BPU9 175 aa13.9□□□□□ -0.18
VEGFA-222ENST00000520948 BMPR1BO00238 502 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 MT-CO2P00403 227 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 IGHV3-23P01764 117 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 FCGR2BP31994 310 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-222ENST00000520948 SLURP1P55000 103 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 ATP5IP56385 69 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-222ENST00000520948 KLF5Q13887 457 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-222ENST00000520948 OXA1LQ15070 435 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 TATDN3Q17R31 274 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 RGS21Q2M5E4 152 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 CLEC19AQ6UXS0 136 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 SLC24A4Q8NFF2 622 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 DCUN1D4Q92564 292 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 DLX4Q92988 240 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-222ENST00000520948 MISP3Q96FF7 219 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 C2orf50Q96LR7 162 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 WWC2-AS2Q96NR7 200 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 MAGT1Q9H0U3 335 aa13.89□□□□□ -0.19
VEGFA-222ENST00000520948 FNDC4Q9H6D8 234 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-222ENST00000520948 IGHV3-21A0A0B4J1V1 117 aa13.88□□□□□ -0.19
VEGFA-222ENST00000520948 CORTO00230 105 aa13.88□□□□□ -0.19
VEGFA-222ENST00000520948 CLEC3BP05452 202 aa13.88□□□□□ -0.19
VEGFA-222ENST00000520948 POLR2GP62487 172 aaKnown RBP eCLIP13.88□□□□□ -0.19
VEGFA-222ENST00000520948 MLANAQ16655 118 aa13.88□□□□□ -0.19
VEGFA-222ENST00000520948 GPR61Q9BZJ8 451 aa13.88□□□□□ -0.19
VEGFA-222ENST00000520948 C21orf62Q9NYP8 219 aa13.88□□□□□ -0.19
VEGFA-222ENST00000520948 PPP5D1E7EU14 171 aa13.87□□□□□ -0.19
VEGFA-222ENST00000520948 LY86O95711 162 aa13.87□□□□□ -0.19
VEGFA-222ENST00000520948 MBPP02686 304 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-222ENST00000520948 IAPPP10997 89 aa13.87□□□□□ -0.19
VEGFA-222ENST00000520948 ZP3P21754 424 aa13.87□□□□□ -0.19
VEGFA-222ENST00000520948 NPY1RP25929 384 aa13.87□□□□□ -0.19
VEGFA-222ENST00000520948 PAX9P55771 341 aa13.87□□□□□ -0.19
VEGFA-222ENST00000520948 GSG1LQ6UXU4 331 aa13.87□□□□□ -0.19
VEGFA-222ENST00000520948 NOXA1Q86UR1 476 aa13.87□□□□□ -0.19
VEGFA-222ENST00000520948 RNASEH2CQ8TDP1 164 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms