RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 MS4A10Q96PG2 267 aa7.09□□□□□ -1.27
CTNNA1-223ENST00000520520 MGST2Q99735 147 aa7.09□□□□□ -1.27
CTNNA1-223ENST00000520520 OPN3Q9H1Y3 402 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-223ENST00000520520 MS4A5Q9H3V2 200 aa7.09□□□□□ -1.27
CTNNA1-223ENST00000520520 PLEKHA3Q9HB20 300 aa7.09□□□□□ -1.27
CTNNA1-223ENST00000520520 CALYQ9NYX4 217 aa7.09□□□□□ -1.27
CTNNA1-223ENST00000520520 JKAMPQ9P055 326 aa7.09□□□□□ -1.27
CTNNA1-223ENST00000520520 FBN3Q75N90 2809 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 A0A1B0GV90 55 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 M0R143 59 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 ESDP10768 282 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 RAB4AP20338 218 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 TNFSF4P23510 183 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 SELENOVP59797 346 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 ERVFC1-1P60608 527 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 HSPE1P61604 102 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 POU2AF1Q16633 256 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 ALKBH6Q3KRA9 238 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 SPINK9Q5DT21 86 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 C1orf194Q5T5A4 169 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 PQLC2Q6ZP29 291 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 BHLHA15Q7RTS1 189 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 MAPK1IP1LQ8NDC0 245 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 CHRDL1Q9BU40 450 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 MRPL32Q9BYC8 188 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 TECRQ9NZ01 308 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 DUSP13Q9UII6 198 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 ZNF257Q9Y2Q1 563 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 ARID1AO14497 2285 aa7.08□□□□□ -1.28
CTNNA1-223ENST00000520520 FN1P02751 2386 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 IGHV2OR16-5A0A0B4J2B6 119 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 SCO2A0A1W2PP80 73 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 NKX6-3A6NJ46 265 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 ZNF705FA8MVS1 300 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 PRSS46E5RG02 174 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 WIPF1O43516 503 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 OR10J4P0C629 311 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 ZNF705DP0CH99 300 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 ZNF705BP0CI00 300 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 CRISP2P16562 243 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 GNG4P50150 75 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 KLF3P57682 345 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 BRWD1-AS2P59051 145 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 RPS16P62249 146 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 LTC4SQ16873 150 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 TIGITQ495A1 244 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 MIC13Q5XKP0 118 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 ZNF664Q8N3J9 261 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 PNKDQ8N490 385 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 CD177Q8N6Q3 437 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 Q8N7P7 452 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 STPG3Q8N7X2 389 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 OR2Z1Q8NG97 314 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 OR1L6Q8NGR2 347 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 FAM234AQ9H0X4 552 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 IFI27L2Q9H2X8 130 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 PATZ1Q9HBE1 687 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 ZNF586Q9NXT0 402 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 IL19Q9UHD0 177 aa7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 LSM4Q9Y4Z0 139 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-223ENST00000520520 FBN1P35555 2871 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 NSD1Q96L73 2696 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 IGHV1-18A0A0C4DH31 117 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 DEFB108AA8MXU0 73 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 TNFSF13O75888 250 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 GOSR1O95249 250 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 APOA2P02652 100 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 OR5G3P0C626 314 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 IRF2P14316 349 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 NPPCP23582 126 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 ADMP35318 185 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 FABP6P51161 128 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 RPL31P62899 125 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 Q0VG73 95 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 EFNB3Q15768 340 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 CLEC12BQ2HXU8 276 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 OR4A47Q6IF82 309 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 Q6ZR03 302 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 BAGE3Q86Y29 109 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 BAGE2Q86Y30 109 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 RFESDQ8TAC1 157 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 TMEM190Q8WZ59 177 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 DDB2Q92466 427 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 EAF1Q96JC9 268 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 C20orf144Q9BQM9 153 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 GNB1LQ9BYB4 327 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 SAMD10Q9BYL1 202 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 COMMD5Q9GZQ3 224 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 MRPL18Q9H0U6 180 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 MSL2Q9HCI7 577 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 OSTCQ9NRP0 149 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 PLSCR4Q9NRQ2 329 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 TMEM14BQ9NUH8 114 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 CUBNO60494 3623 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 MED12LQ86YW9 2145 aa7.06□□□□□ -1.28
CTNNA1-223ENST00000520520 CHD3Q12873 2000 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-223ENST00000520520 IGKV1D-17A0A075B6S4 117 aa7.05□□□□□ -1.28
CTNNA1-223ENST00000520520 IGHV3-64DA0A0J9YX35 117 aa7.05□□□□□ -1.28
CTNNA1-223ENST00000520520 KBTBD11-OT1A0A1B0GTJ5 212 aa7.05□□□□□ -1.28
CTNNA1-223ENST00000520520 FCN1O00602 326 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms