RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MAS1P04201 325 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 CD74P04233 296 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 PET100P0DJ07 73 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 CD40LGP29965 261 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 KIR3DL2P43630 455 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 IDH2P48735 452 aaKnown RBP2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 POLR2HP52434 150 aaKnown RBP2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 SYCNQ0VAF6 134 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 PMVKQ15126 192 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 UAP1Q16222 522 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 CEACAM21Q3KPI0 293 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 PABPC1L2AQ5JQF8 200 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 TEX30Q5JUR7 227 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 SLC36A1Q7Z2H8 476 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 WDR86Q86TI4 376 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 C20orf196Q8IYI0 205 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 GAPTQ8N292 157 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 LRRC18Q8N456 261 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 CCNYL1Q8N7R7 359 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 CYB561D1Q8N8Q1 229 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR13G1Q8NGZ3 307 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 SRSF12Q8WXF0 261 aaKnown RBP2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 GHSRQ92847 366 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 TMEM106AQ96A25 262 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 CMBLQ96DG6 245 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 MALSU1Q96EH3 234 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 SMIM8Q96KF7 97 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 DCUN1D5Q9BTE7 237 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 ALX4Q9H161 411 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 C8orf17Q9NRJ1 99 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 SNX24Q9Y343 169 aa2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB1P23-201ENST00000518743 IGHV3-49A0A0A0MS15 119 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 A0A1B0GX12 115 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 CLDN24A6NM45 220 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 CD300LBA8K4G0 201 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 A8MWL6 223 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 OR11H12B2RN74 326 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 H0YJW9 148 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 ITGB1BP1O14713 200 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 RBFOX2O43251 390 aaKnown RBP eCLIP2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 PSMG1O95456 288 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 ZNF823P16415 610 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 RPS4Y1P22090 263 aaKnown RBP2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 BRS3P32247 399 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 FUSP35637 526 aaKnown RBP eCLIP2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 OPRK1P41145 380 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 MARCKSL1P49006 195 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 NUDT2P50583 147 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 DYNLT3P51808 116 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 BASP1P80723 227 aaKnown RBP2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 PRKCDQ05655 676 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 BAXQ07812 192 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 BNIP2Q12982 314 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 HES1Q14469 280 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 LAMTOR1Q6IAA8 161 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 FAM231DQ6ZW35 169 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 SLC35E3Q7Z769 313 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 DPPA2Q7Z7J5 298 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 CLDN22Q8N7P3 220 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 C7orf50Q9BRJ6 194 aaKnown RBP2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 IFT46Q9NQC8 304 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 SPANXB1Q9NS25 103 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 TBL2Q9Y4P3 447 aaKnown RBP2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 TNXBP22105 4242 aa2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
HMGB1P23-201ENST00000518743 A0A087X0T9 212 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 RLN2P04090 185 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 FAM228BP0C875 321 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 TAC1P20366 129 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 IL3RAP26951 378 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 GRB2P62993 217 aaKnown RBP2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 ELF3P78545 371 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 MED21Q13503 144 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 RAB31Q13636 194 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 MAPK14Q16539 360 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 RNASE13Q5GAN3 156 aaKnown RBP2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF678Q5SXM1 525 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 KDM4DQ6B0I6 523 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 FAM71E1Q6IPT2 247 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 C10orf111Q8N326 155 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 SLC25A29Q8N8R3 303 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 Q8N9L7 120 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR52L1Q8NGH7 329 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR9Q1Q8NGQ5 310 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 CASTOR1Q8WTX7 329 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 BLNKQ8WV28 456 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 SLC25A46Q96AG3 418 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 VCXQ9H320 206 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 RHOFQ9HBH0 211 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 PARP11Q9NR21 331 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 HSPE1-MOB4S4R3N1 261 aa2.96□□□□□ -1.94
HMGB1P23-201ENST00000518743 LOC102724200A0A096LPH7 203 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 FTCDNL1E5RQL4 147 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 NDUFS6O75380 124 aaKnown RBP2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 CRTAPO75718 401 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 AHSA1O95433 338 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 CD7P09564 240 aa2.95□□□□□ -1.94
HMGB1P23-201ENST00000518743 DNAH10OSP0CZ25 163 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms