RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 TOPBP1Q92547 1522 aa-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 BDP1A6H8Y1 2624 aa-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 MUC4Q99102 2169 aa-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 SPINT3P49223 89 aa-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 CCL20P78556 96 aa-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 SPANXN3Q5MJ09 141 aa-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 IQCF2Q8IXL9 164 aa-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 C3orf56Q8N813 242 aa-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 DHRS9Q9BPW9 319 aa-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 MYO18AQ92614 2054 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1088P-201ENST00000516850 PHRF1Q9P1Y6 1649 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 KLF7O75840 302 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 OR2B3O76000 313 aa-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 TCL1BO95988 128 aa-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 ORM1P02763 201 aa-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 FAM228BP0C875 321 aa-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 CDC34P49427 236 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 BATFQ16520 125 aa-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 C12orf74Q32Q52 190 aa-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 C1orf194Q5T5A4 169 aa-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 DNM1P34Q6PK57 102 aa-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 XPNPEP1Q9NQW7 623 aa-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 SPANXB1Q9NS25 103 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-1088P-201ENST00000516850 OTOGQ6ZRI0 2925 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HEATR1Q9H583 2144 aaKnown RBP-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 TPRP12270 2363 aaKnown RBP-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 TRBV6-4A0A1B0GX49 114 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 TLCD2A6NGC4 264 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 F8VZ95 297 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 CCL1P22362 96 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 FOXA3P55318 350 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 QRFPP83859 136 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 AADACL3Q5VUY0 350 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 BPIFA4PQ86YQ2 179 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 OR5A1Q8NGJ0 315 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 OR10AC1Q8NH08 325 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 DERL1Q9BUN8 251 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 OR51I2Q9H344 312 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 TNFSF18Q9UNG2 199 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 POLR1DQ9Y2S0 133 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 SBF1O95248 1867 aa-0.56□□□□□ -2.5
RNU6-1088P-201ENST00000516850 ECM29Q5VYK3 1845 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 TRBV20OR9-2A0A075B6H5 130 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 PQLC2LA1A4F0 135 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 TOX3O15405 576 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 IL3P08700 152 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 PET100P0DJ07 73 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 CLDN12P56749 244 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 RPL22L1Q6P5R6 122 aaKnown RBP-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 CLVS1Q8IUQ0 354 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 CLECL1Q8IZS7 167 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 ATOH7Q8N100 152 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 OR10J5Q8NHC4 309 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 MED29Q9NX70 200 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 DKKL1Q9UK85 242 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HS3ST2Q9Y278 367 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 LOC285556D6RIA3 1793 aa-0.57□□□□□ -2.5
RNU6-1088P-201ENST00000516850 SIP14410 1827 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 IGLV3-32A0A0A0MS00 114 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 LOC100506127A0A0U1RQW1 187 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 INMT-MINDY4F8WBC2 141 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 IVLP07476 585 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 RD3LP0DJH9 198 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HIST1H2BOP23527 126 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HIST1H2BBP33778 126 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HIST1H2BDP58876 126 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HIST1H2BCP62807 126 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 GRK1Q15835 563 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HIST2H2BEQ16778 126 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 Q3ZCU0 254 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 MIR17HGQ75NE6 70 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 DNAJC9Q8WXX5 260 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HIST1H2BHQ93079 126 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HIST1H2BNQ99877 126 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 HIST1H2BMQ99879 126 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 SLC35A3Q9Y2D2 325 aa-0.58□□□□□ -2.5
RNU6-1088P-201ENST00000516850 FANCMQ8IYD8 2048 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 A0A0J9YY10 115 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 TINCRA0A1B0GVN0 87 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 A0A1B0GX78 115 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 CCL16O15467 120 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 NKX2-5P52952 324 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 MAP3K7CLP57077 242 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 DEFB113Q30KQ7 82 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 CD302Q8IX05 232 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 BOD1L2Q8IYS8 172 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 CNBD2Q96M20 576 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 SIKE1Q9BRV8 207 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 PIK3R4Q99570 1358 aa-0.59□□□□□ -2.5
RNU6-1088P-201ENST00000516850 MKRN2OSH3BPM6 223 aa-0.6□□□□□ -2.51
RNU6-1088P-201ENST00000516850 BRI3O95415 125 aa-0.6□□□□□ -2.51
RNU6-1088P-201ENST00000516850 COQ5Q5HYK3 327 aa-0.6□□□□□ -2.51
RNU6-1088P-201ENST00000516850 SDHAF4Q5VUM1 108 aa-0.6□□□□□ -2.51
RNU6-1088P-201ENST00000516850 HAGHLQ6PII5 290 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-1088P-201ENST00000516850 COPS6Q7L5N1 327 aa-0.6□□□□□ -2.51
RNU6-1088P-201ENST00000516850 TEX47Q8TBZ9 253 aa-0.6□□□□□ -2.51
RNU6-1088P-201ENST00000516850 PSMF1Q92530 271 aa-0.6□□□□□ -2.51
RNU6-1088P-201ENST00000516850 DIRAS2Q96HU8 199 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms