RNA–Protein interactions for RNA: ENST00000508689.1

MATR3-213, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-213ENST00000508689 TMEM56Q96MV1 263 aa12.29□□□□□ -0.44
MATR3-213ENST00000508689 ZNF436Q9C0F3 470 aaPredicted RBP12.29□□□□□ -0.44
MATR3-213ENST00000508689 FNDC4Q9H6D8 234 aaPredicted RBP12.29□□□□□ -0.44
MATR3-213ENST00000508689 PLEKHA3Q9HB20 300 aa12.29□□□□□ -0.44
MATR3-213ENST00000508689 PEMTQ9UBM1 199 aa12.29□□□□□ -0.44
MATR3-213ENST00000508689 ZMAT5Q9UDW3 170 aaKnown RBP12.29□□□□□ -0.44
MATR3-213ENST00000508689 NBEAL2Q6ZNJ1 2754 aa12.29□□□□□ -0.44
MATR3-213ENST00000508689 IGHV3-49A0A0A0MS15 119 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 A8MWP6 167 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 IFNA17P01571 189 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 CTSGP08311 255 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 CCR6P51684 374 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 Q56UQ5 140 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 FAM209BQ5JX69 171 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 LYZL2Q7Z4W2 148 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 TMED4Q7Z7H5 227 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 TOMM5Q8N4H5 51 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 ZNF114Q8NC26 417 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 RNASE11Q8TAA1 199 aaKnown RBP12.28□□□□□ -0.44
MATR3-213ENST00000508689 DYNLRB2Q8TF09 96 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 RBPMSQ93062 196 aaKnown RBP12.28□□□□□ -0.44
MATR3-213ENST00000508689 RABL2AQ9UBK7 228 aaPredicted RBP12.28□□□□□ -0.44
MATR3-213ENST00000508689 RABL2BQ9UNT1 228 aa12.28□□□□□ -0.44
MATR3-213ENST00000508689 SCAF4O95104 1147 aaKnown RBP12.27□□□□□ -0.45
MATR3-213ENST00000508689 S100A5P33763 92 aa12.27□□□□□ -0.45
MATR3-213ENST00000508689 CNPY1Q3B7I2 92 aa12.27□□□□□ -0.45
MATR3-213ENST00000508689 ANKRD55Q3KP44 614 aa12.27□□□□□ -0.45
MATR3-213ENST00000508689 HSD17B13Q7Z5P4 300 aaPredicted RBP12.27□□□□□ -0.45
MATR3-213ENST00000508689 FAM219AQ8IW50 185 aa12.27□□□□□ -0.45
MATR3-213ENST00000508689 TMEM190Q8WZ59 177 aa12.27□□□□□ -0.45
MATR3-213ENST00000508689 C19orf73Q9NVV2 129 aa12.27□□□□□ -0.45
MATR3-213ENST00000508689 SCP2D1Q9UJQ7 156 aa12.27□□□□□ -0.45
MATR3-213ENST00000508689 TMEM56-RWDD3S4R434 201 aa12.27□□□□□ -0.45
MATR3-213ENST00000508689 HOXA1P49639 335 aaPredicted RBP12.26□□□□□ -0.45
MATR3-213ENST00000508689 GUCA2BQ16661 112 aa12.26□□□□□ -0.45
MATR3-213ENST00000508689 LCN12Q6JVE5 192 aa12.26□□□□□ -0.45
MATR3-213ENST00000508689 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
MATR3-213ENST00000508689 THYN1Q9P016 225 aa12.26□□□□□ -0.45
MATR3-213ENST00000508689 FLVCR2Q9UPI3 526 aa12.26□□□□□ -0.45
MATR3-213ENST00000508689 BTCP35070 178 aa12.25□□□□□ -0.45
MATR3-213ENST00000508689 FAM106AQ4KMX7 169 aa12.25□□□□□ -0.45
MATR3-213ENST00000508689 AARDQ4LEZ3 155 aa12.25□□□□□ -0.45
MATR3-213ENST00000508689 NMSQ5H8A3 153 aa12.25□□□□□ -0.45
MATR3-213ENST00000508689 ZNF57Q68EA5 555 aaPredicted RBP12.25□□□□□ -0.45
MATR3-213ENST00000508689 PVRIGQ6DKI7 326 aa12.25□□□□□ -0.45
MATR3-213ENST00000508689 DEFB125Q8N687 156 aa12.25□□□□□ -0.45
MATR3-213ENST00000508689 GALNT14Q96FL9 552 aa12.25□□□□□ -0.45
MATR3-213ENST00000508689 BSCL2Q96G97 398 aaPredicted RBP12.25□□□□□ -0.45
MATR3-213ENST00000508689 C20orf24Q9BUV8 137 aa12.25□□□□□ -0.45
MATR3-213ENST00000508689 RETNQ9HD89 108 aa12.25□□□□□ -0.45
MATR3-213ENST00000508689 IGHV3OR16-13A0A075B7E8 117 aa12.24□□□□□ -0.45
MATR3-213ENST00000508689 IGHV3-74A0A0B4J1X5 117 aa12.24□□□□□ -0.45
MATR3-213ENST00000508689 C8orf88P0DMB2 117 aa12.24□□□□□ -0.45
MATR3-213ENST00000508689 CD81P60033 236 aa12.24□□□□□ -0.45
MATR3-213ENST00000508689 ERHP84090 104 aaKnown RBP12.24□□□□□ -0.45
MATR3-213ENST00000508689 DHODHQ02127 395 aa12.24□□□□□ -0.45
MATR3-213ENST00000508689 BSXQ3C1V8 233 aa12.24□□□□□ -0.45
MATR3-213ENST00000508689 SGPP2Q8IWX5 399 aa12.24□□□□□ -0.45
MATR3-213ENST00000508689 KMT2CQ8NEZ4 4911 aaKnown RBP12.24□□□□□ -0.45
MATR3-213ENST00000508689 U3KQK5 164 aa12.24□□□□□ -0.45
MATR3-213ENST00000508689 RBMY1BA6NDE4 496 aaKnown RBP12.23□□□□□ -0.45
MATR3-213ENST00000508689 RBMY1EA6NEQ0 496 aaKnown RBP12.23□□□□□ -0.45
MATR3-213ENST00000508689 INS-IGF2F8WCM5 200 aa12.23□□□□□ -0.45
MATR3-213ENST00000508689 APOHP02749 345 aaPredicted RBP12.23□□□□□ -0.45
MATR3-213ENST00000508689 RBMY1DP0C7P1 496 aaKnown RBP12.23□□□□□ -0.45
MATR3-213ENST00000508689 PPP1R1AQ13522 171 aa12.23□□□□□ -0.45
MATR3-213ENST00000508689 SPANXN2Q5MJ10 180 aa12.23□□□□□ -0.45
MATR3-213ENST00000508689 LILRB2Q8N423 598 aa12.23□□□□□ -0.45
MATR3-213ENST00000508689 CITED4Q96RK1 184 aa12.23□□□□□ -0.45
MATR3-213ENST00000508689 NEURL2Q9BR09 285 aa12.23□□□□□ -0.45
MATR3-213ENST00000508689 MFAP4P55083 255 aa12.22□□□□□ -0.45
MATR3-213ENST00000508689 SPCS3P61009 180 aa12.22□□□□□ -0.45
MATR3-213ENST00000508689 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
MATR3-213ENST00000508689 IGHV3-66A0A0C4DH42 116 aa12.21□□□□□ -0.45
MATR3-213ENST00000508689 A0A1B0GU03 582 aa12.21□□□□□ -0.45
MATR3-213ENST00000508689 NDUFA4O00483 81 aa12.21□□□□□ -0.45
MATR3-213ENST00000508689 B3GALNT1O75752 331 aa12.21□□□□□ -0.45
MATR3-213ENST00000508689 VAMP1P23763 118 aa12.21□□□□□ -0.45
MATR3-213ENST00000508689 SNCAP37840 140 aa12.21□□□□□ -0.45
MATR3-213ENST00000508689 DCTN2Q13561 401 aaKnown RBP12.21□□□□□ -0.45
MATR3-213ENST00000508689 HAGHQ16775 308 aa12.21□□□□□ -0.45
MATR3-213ENST00000508689 OR2K2Q8NGT1 345 aa12.21□□□□□ -0.45
MATR3-213ENST00000508689 PDCD10Q9BUL8 212 aa12.21□□□□□ -0.45
MATR3-213ENST00000508689 TECRQ9NZ01 308 aaKnown RBP12.21□□□□□ -0.45
MATR3-213ENST00000508689 CEBPZOSA8MTT3 80 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 MPTX1A8MV57 137 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 PLA2G10O15496 165 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 CYB5BO43169 146 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 ATG12O94817 140 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 YIF1AO95070 293 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 SULT1A3P0DMM9 295 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 SULT1A4P0DMN0 295 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 IL7P13232 177 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 FAUP35544 74 aaKnown RBP12.2□□□□□ -0.46
MATR3-213ENST00000508689 AP3S2P59780 193 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 SPSB3Q6PJ21 355 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 TOMM20LQ6UXN7 152 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 LINC00322Q6ZN03 302 aaPredicted RBP12.2□□□□□ -0.46
MATR3-213ENST00000508689 GTSCR1Q86UQ5 136 aa12.2□□□□□ -0.46
MATR3-213ENST00000508689 OR1L6Q8NGR2 347 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms