RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	ZNF114	Q8NC26	417 aa		10.7	□□□□□ -0.7
CCHCR1-222	ENST00000507459	OR2K2	Q8NGT1	345 aa		10.7	□□□□□ -0.7
CCHCR1-222	ENST00000507459	GPR146	Q96CH1	333 aa		10.7	□□□□□ -0.7
CCHCR1-222	ENST00000507459	CHRDL1	Q9BU40	450 aa		10.7	□□□□□ -0.7
CCHCR1-222	ENST00000507459	PALMD	Q9NP74	551 aa		10.7	□□□□□ -0.7
CCHCR1-222	ENST00000507459	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.7	□□□□□ -0.7
CCHCR1-222	ENST00000507459		A8MWP6	167 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459		F8W735	103 aa	Predicted RBP	10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459		I3L2K1	104 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	IGHV4-30-4	P0DP06	118 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TMEM187	Q14656	261 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SPSB3	Q6PJ21	355 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TMED4	Q7Z7H5	227 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SBSPON	Q8IVN8	264 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	C20orf24	Q9BUV8	137 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TECR	Q9NZ01	308 aa	Known RBP	10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	CACNG5	Q9UF02	275 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	UFC1	Q9Y3C8	167 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TMEM56-RWDD3	S4R434	201 aa		10.69	□□□□□ -0.7
CCHCR1-222	ENST00000507459	COL7A1	Q02388	2944 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	IGHV3OR16-8	A0A075B7F1	116 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	ZNF785	A8K8V0	405 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	NXPH3	O95157	252 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	ADM	P35318	185 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	INPP1	P49441	399 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SUB1	P53999	127 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	MFAP4	P55083	255 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	CD81	P60033	236 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	BTNL8	Q6UX41	500 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	WDR89	Q96FK6	387 aa	Predicted RBP	10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	GALNT14	Q96FL9	552 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SRR	Q9GZT4	340 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	NDUFA13	Q9P0J0	144 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	MLX	Q9UH92	298 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459		U3KQK5	164 aa		10.68	□□□□□ -0.7
CCHCR1-222	ENST00000507459	LINC00854	A0A1B0GVQ3	168 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	INS-IGF2	F8WCM5	200 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	NUPL2	O15504	423 aa	Known RBP	10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	ZNF207	O43670	478 aa	Known RBP	10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	CTSG	P08311	255 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	RNASE2	P10153	161 aa	Known RBP	10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	ANXA3	P12429	323 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SPCS3	P61009	180 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SUPT4H1	P63272	117 aa	Known RBP	10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	BAK1	Q16611	211 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TRIQK	Q629K1	86 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TMEM190	Q8WZ59	177 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	ATP6V0B	Q99437	205 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TUBA4B	Q9H853	241 aa		10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	GAR1	Q9NY12	217 aa	Known RBP	10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	MRPL27	Q9P0M9	148 aa	Known RBP	10.67	□□□□□ -0.7
CCHCR1-222	ENST00000507459	CEBPZOS	A8MTT3	80 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	NDUFA4	O00483	81 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	GNG7	O60262	68 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	YIF1A	O95070	293 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SCAF4	O95104	1147 aa	Known RBP	10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	CD7	P09564	240 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SULT1A3	P0DMM9	295 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SULT1A4	P0DMN0	295 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	ELL	P55199	621 aa	Predicted RBP	10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	LYZL2	Q7Z4W2	148 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TMEM61	Q8N0U2	210 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	OR52E5	Q8NH55	327 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	IL22RA2	Q969J5	263 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	MARC2	Q969Z3	335 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TXN2	Q99757	166 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	NEURL2	Q9BR09	285 aa		10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	HEYL	Q9NQ87	328 aa	Predicted RBP	10.66	□□□□□ -0.7
CCHCR1-222	ENST00000507459	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	C8orf88	P0DMB2	117 aa		10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	VAMP1	P23763	118 aa		10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	CCR6	P51684	374 aa		10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	REL	Q04864	619 aa	Predicted RBP	10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	TMEM128	Q5BJH2	165 aa		10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	LGI3	Q8N145	548 aa		10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	DUSP18	Q8NEJ0	188 aa		10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	DEDD2	Q8WXF8	326 aa		10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	DAZ1	Q9NQZ3	744 aa	Known RBP	10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459	C19orf73	Q9NVV2	129 aa		10.65	□□□□□ -0.7
CCHCR1-222	ENST00000507459		A0A0B4J2A0	478 aa		10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459	CORT	O00230	105 aa		10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459	FCGR2B	P31994	310 aa	Predicted RBP	10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459	OPRK1	P41145	380 aa		10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459	NPBWR1	P48145	328 aa		10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SRPX	P78539	464 aa		10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459	MLANA	Q16655	118 aa		10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459	AARD	Q4LEZ3	155 aa		10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459	DEFB125	Q8N687	156 aa		10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SHPK	Q9UHJ6	478 aa		10.64	□□□□□ -0.71
CCHCR1-222	ENST00000507459		A8MZ25	164 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	HTR2B	P41595	481 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SMCO1	Q147U7	214 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	RBMS2	Q15434	407 aa	Known RBP	10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	NMS	Q5H8A3	153 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	PVRIG	Q6DKI7	326 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	CENPS	Q8N2Z9	138 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	OR52B4	Q8NGK2	314 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms