RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ANXA7P20073 488 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-216ENST00000506537 PVRIGQ6DKI7 326 aa13.9□□□□□ -0.18
PDLIM7-216ENST00000506537 MISP3Q96FF7 219 aa13.9□□□□□ -0.18
PDLIM7-216ENST00000506537 ELOVL1Q9BW60 279 aa13.9□□□□□ -0.18
PDLIM7-216ENST00000506537 C21orf62Q9NYP8 219 aa13.9□□□□□ -0.18
PDLIM7-216ENST00000506537 TBC1D24Q9ULP9 559 aa13.9□□□□□ -0.18
PDLIM7-216ENST00000506537 DUXBA0A1W2PPF3 345 aa13.89□□□□□ -0.19
PDLIM7-216ENST00000506537 C9orf170A2RU37 121 aa13.89□□□□□ -0.19
PDLIM7-216ENST00000506537 CSN3P07498 182 aa13.89□□□□□ -0.19
PDLIM7-216ENST00000506537 EDN2P20800 178 aa13.89□□□□□ -0.19
PDLIM7-216ENST00000506537 SMCO1Q147U7 214 aa13.89□□□□□ -0.19
PDLIM7-216ENST00000506537 BSXQ3C1V8 233 aa13.89□□□□□ -0.19
PDLIM7-216ENST00000506537 MRAPQ8TCY5 172 aa13.89□□□□□ -0.19
PDLIM7-216ENST00000506537 OR4C12Q96R67 309 aa13.89□□□□□ -0.19
PDLIM7-216ENST00000506537 WDR12Q9GZL7 423 aaKnown RBP13.89□□□□□ -0.19
PDLIM7-216ENST00000506537 OR2T8A6NH00 312 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 TGOLN2O43493 480 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 MT-CO2P00403 227 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 IGLV1-51P01701 117 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 IGHV3-48P01763 117 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 OR4E1P0C645 316 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 SNCAP37840 140 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 DHRS2Q13268 280 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 ZNF846Q147U1 533 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 ADAMTSL5Q6ZMM2 481 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 GPHB5Q86YW7 130 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 ZNF414Q96IQ9 312 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 PRR25Q96S07 402 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 C20orf85Q9H1P6 137 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 ENY2Q9NPA8 101 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 HSPB7Q9UBY9 170 aa13.88□□□□□ -0.19
PDLIM7-216ENST00000506537 IGHV3-35A0A0C4DH35 117 aa13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 A0A1B0GU03 582 aa13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 PITX3O75364 302 aa13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 ADMP35318 185 aa13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 IFITM3Q01628 133 aa13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 TNFRSF9Q07011 255 aa13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 TATDN3Q17R31 274 aa13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 LYG2Q86SG7 212 aa13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 PINX1Q96BK5 328 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 BSCL2Q96G97 398 aaPredicted RBP13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 ZNF256Q9Y2P7 627 aaPredicted RBP13.87□□□□□ -0.19
PDLIM7-216ENST00000506537 PIGBOS1A0A0B4J2F0 54 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 CEBPZOSA8MTT3 80 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 LGALS9O00182 355 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 UPK1BO75841 260 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 TCRBP04435 133 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 SPNP16150 400 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 PLET1Q6UQ28 207 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 UNQ9165/PRO28630Q6UXU0 137 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 UBAC2Q8NBM4 344 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 TMEM170AQ8WVE7 144 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 ATP6V0BQ99437 205 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 SIGLEC8Q9NYZ4 499 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 PEMTQ9UBM1 199 aa13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 ZMAT5Q9UDW3 170 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-216ENST00000506537 TMEM213A2RRL7 107 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 C2orf70A6NJV1 201 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 HOXB5P09067 269 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 FCGR2BP31994 310 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 ASAH1Q13510 395 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 C4orf46Q504U0 113 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 Q56UQ5 140 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 GGNBP1Q5YKI7 109 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 OR52B4Q8NGK2 314 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 OR1S1Q8NH92 325 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 ZNF436Q9C0F3 470 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 RBKSQ9H477 322 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 FNDC4Q9H6D8 234 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 HEYLQ9NQ87 328 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 NUDT15Q9NV35 164 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 TMED3Q9Y3Q3 217 aa13.85□□□□□ -0.19
PDLIM7-216ENST00000506537 TRAV6A0A075B6T7 132 aa13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 A8MWP6 167 aa13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 ADAP1O75689 374 aa13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 CTSGP08311 255 aa13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 SLC25A6P12236 298 aa13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 HTR2BP41595 481 aa13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 SUB1P53999 127 aaKnown RBP eCLIP13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 FAM106AQ4KMX7 169 aa13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 CACNG8Q8WXS5 425 aa13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 MRPL36Q9P0J6 103 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-216ENST00000506537 SORL1Q92673 2214 aa13.83□□□□□ -0.2
PDLIM7-216ENST00000506537 DNAH9Q9NYC9 4486 aa13.83□□□□□ -0.2
PDLIM7-216ENST00000506537 MFAP4P55083 255 aa13.83□□□□□ -0.2
PDLIM7-216ENST00000506537 C2orf83Q53S99 150 aa13.83□□□□□ -0.2
PDLIM7-216ENST00000506537 SPSB3Q6PJ21 355 aa13.83□□□□□ -0.2
PDLIM7-216ENST00000506537 SLC24A4Q8NFF2 622 aa13.83□□□□□ -0.2
PDLIM7-216ENST00000506537 DTD1Q8TEA8 209 aa13.83□□□□□ -0.2
PDLIM7-216ENST00000506537 TMEM190Q8WZ59 177 aa13.83□□□□□ -0.2
PDLIM7-216ENST00000506537 CACFD1Q9UGQ2 172 aa13.83□□□□□ -0.2
PDLIM7-216ENST00000506537 ZNF320A2RRD8 509 aa13.82□□□□□ -0.2
PDLIM7-216ENST00000506537 MPTX1A8MV57 137 aa13.82□□□□□ -0.2
PDLIM7-216ENST00000506537 CORTO00230 105 aa13.82□□□□□ -0.2
PDLIM7-216ENST00000506537 LY86O95711 162 aa13.82□□□□□ -0.2
PDLIM7-216ENST00000506537 FOLR2P14207 255 aa13.82□□□□□ -0.2
PDLIM7-216ENST00000506537 MLANAQ16655 118 aa13.82□□□□□ -0.2
PDLIM7-216ENST00000506537 TM4SF20Q53R12 229 aa13.82□□□□□ -0.2
PDLIM7-216ENST00000506537 COQ8AQ8NI60 647 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms