RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 RHOBP62745 196 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 EFNB3Q15768 340 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 ATRXP46100 2492 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 YLPM1P49750 1951 aaKnown RBP12.04□□□□□ -0.48
CHTOP-206ENST00000495554 A8MWP6 167 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 SAA1P0DJI8 122 aaPredicted RBP12.04□□□□□ -0.48
CHTOP-206ENST00000495554 GALR1P47211 349 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 GNB1P62873 340 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 ARFGEF3Q5TH69 2177 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 OR5AN1Q8NGI8 311 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 H1FXQ92522 213 aaKnown RBP12.04□□□□□ -0.48
CHTOP-206ENST00000495554 FRZBQ92765 325 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 ZNF479Q96JC4 524 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 ATP6V0BQ99437 205 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 MRPL20Q9BYC9 149 aaKnown RBP12.04□□□□□ -0.48
CHTOP-206ENST00000495554 TRGC1P0CF51 173 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 SRD5A3Q9H8P0 318 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 DYNLRB1Q9NP97 96 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 H0YJW9 148 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 PHOX2AO14813 284 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 TCF21O43680 179 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 NDUFB4O95168 129 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 CA7P43166 264 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 PRR20EP86478 221 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 PRR20CP86479 221 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 PRR20DP86480 221 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 PRR20BP86481 221 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 PRR20AP86496 221 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 C2orf83Q53S99 150 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 C8orf31Q8N9H6 132 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 NECAP1Q8NC96 275 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 HARBI1Q96MB7 349 aa12.03□□□□□ -0.48
CHTOP-206ENST00000495554 NBASA2RRP1 2371 aa12.02□□□□□ -0.48
CHTOP-206ENST00000495554 LYPD2Q6UXB3 125 aa12.02□□□□□ -0.48
CHTOP-206ENST00000495554 TMEM144Q7Z5S9 345 aa12.02□□□□□ -0.48
CHTOP-206ENST00000495554 LINC01551Q86U37 167 aa12.02□□□□□ -0.48
CHTOP-206ENST00000495554 RNF2Q99496 336 aa12.02□□□□□ -0.48
CHTOP-206ENST00000495554 SNHG12Q9BXW3 62 aa12.02□□□□□ -0.48
CHTOP-206ENST00000495554 KAAG1Q9UBP8 84 aa12.02□□□□□ -0.48
CHTOP-206ENST00000495554 ELOA3CA0A087WX78 387 aaPredicted RBP12.02□□□□□ -0.49
CHTOP-206ENST00000495554 PPP1R2P9O14990 202 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 CD99P14209 185 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 IGFBP2P18065 325 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 TMEM177Q53S58 311 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 FAM71F2Q6NXP2 309 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 SHISA2Q6UWI4 295 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 LINC00311Q8N616 119 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 OR1L8Q8NGR8 309 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 OR10X1Q8NGY0 326 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 LINC01560Q8TB33 94 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 TMEM186Q96B77 213 aa12.02□□□□□ -0.49
CHTOP-206ENST00000495554 FLYWCH2Q96CP2 140 aaKnown RBP12.02□□□□□ -0.49
CHTOP-206ENST00000495554 GAR1Q9NY12 217 aaKnown RBP12.02□□□□□ -0.49
CHTOP-206ENST00000495554 IFITM10A6NMD0 228 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 DVL1O14640 695 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 MT-CO2P00403 227 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 PLAUP00749 431 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 GRNP28799 593 aaKnown RBP12.01□□□□□ -0.49
CHTOP-206ENST00000495554 S100A2P29034 98 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 GCHFRP30047 84 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 ZNF48Q96MX3 618 aaPredicted RBP12.01□□□□□ -0.49
CHTOP-206ENST00000495554 COMMD5Q9GZQ3 224 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.01□□□□□ -0.49
CHTOP-206ENST00000495554 PPP5D1E7EU14 171 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 K7EP13 123 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 LIPFP07098 398 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 SRP14P37108 136 aaKnown RBP12.01□□□□□ -0.49
CHTOP-206ENST00000495554 KLRB1Q12918 225 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 OR4C13Q8NGP0 309 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 TMEM204Q9BSN7 226 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 CTSZQ9UBR2 303 aa12.01□□□□□ -0.49
CHTOP-206ENST00000495554 NBEAP1P0C6P0 100 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 LINC00869P0C866 280 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 RPL8P62917 257 aaKnown RBP12□□□□□ -0.49
CHTOP-206ENST00000495554 CDSNQ15517 529 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 C4orf17Q53FE4 359 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 DERL1Q9BUN8 251 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 NDUFA4L2Q9NRX3 87 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 SLC45A2Q9UMX9 530 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 RNASE2P10153 161 aaKnown RBP12□□□□□ -0.49
CHTOP-206ENST00000495554 USF1P22415 310 aaPredicted RBP12□□□□□ -0.49
CHTOP-206ENST00000495554 LOXP28300 417 aaPredicted RBP12□□□□□ -0.49
CHTOP-206ENST00000495554 REG1BP48304 166 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 FBXL19-AS1Q494R0 122 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 PDPNQ86YL7 162 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 VSTM2AQ8TAG5 236 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 ELOVL1Q9BW60 279 aa12□□□□□ -0.49
CHTOP-206ENST00000495554 ZNF430Q9H8G1 570 aaPredicted RBP12□□□□□ -0.49
CHTOP-206ENST00000495554 INS-IGF2F8WCM5 200 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 SIAH2O43255 324 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 SPATA31B1PQ5VZV4 182 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 KCNIP4Q6PIL6 250 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 ST6GALNAC3Q8NDV1 305 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 OR2T10Q8NGZ9 312 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 OR4X1Q8NH49 305 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 OR4A5Q8NH83 315 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 NOL4LQ96MY1 436 aaPredicted RBP11.99□□□□□ -0.49
CHTOP-206ENST00000495554 NABP2Q9BQ15 211 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 CCL21O00585 134 aa11.99□□□□□ -0.49
CHTOP-206ENST00000495554 GGCTO75223 188 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms