RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TXN2Q99757 166 aa11.06□□□□□ -0.64
GPC1-209ENST00000495100 AGMATQ9BSE5 352 aa11.06□□□□□ -0.64
GPC1-209ENST00000495100 EGLN1Q9GZT9 426 aa11.06□□□□□ -0.64
GPC1-209ENST00000495100 hADV38S2A0JD32 116 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 SRRM5B3KS81 715 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 TMEM183AQ8IXX5 376 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 ZBTB34Q8NCN2 500 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 IER2Q9BTL4 223 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 IFI27L2Q9H2X8 130 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 ZNF331Q9NQX6 463 aaPredicted RBP11.05□□□□□ -0.64
GPC1-209ENST00000495100 WDR83OSQ9Y284 106 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 DMRT1Q9Y5R6 373 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 A6NNC1 897 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 HIST1H1BP16401 226 aaKnown RBP11.05□□□□□ -0.64
GPC1-209ENST00000495100 CD40P25942 277 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 DMRTA1Q5VZB9 504 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 MMD2Q8IY49 270 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 P2RX4Q99571 388 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 KLF2Q9Y5W3 355 aaPredicted RBP11.05□□□□□ -0.64
GPC1-209ENST00000495100 ABCA12Q86UK0 2595 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 TRBV20OR9-2A0A075B6H5 130 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 A0A087WWC5 75 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 ZNF891A8MT65 544 aaPredicted RBP11.05□□□□□ -0.64
GPC1-209ENST00000495100 C16orf97H3BN30 126 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 SERF1AO75920 110 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 IGHV2-70P01814 119 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 SSBP2P81877 361 aaPredicted RBP11.05□□□□□ -0.64
GPC1-209ENST00000495100 RELBQ01201 579 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 ZNF664Q8N3J9 261 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 Q8NFD4 153 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 OR5B3Q8NH48 314 aa11.05□□□□□ -0.64
GPC1-209ENST00000495100 KBTBD11-OT1A0A1B0GTJ5 212 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 M0QZ24 198 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 CASP6P55212 293 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 Q6ZS49 121 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 ST6GALNAC6Q969X2 333 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 FAM90A26D6RGX4 464 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 WNT2P09544 360 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 SRIP30626 198 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 PMCHL1Q16048 86 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 DKK4Q9UBT3 224 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 NCBP2LA6PVI3 153 aaKnown RBP11.04□□□□□ -0.64
GPC1-209ENST00000495100 VSTM5A8MXK1 200 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 TMEM250H0YL14 139 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 GZMBP10144 247 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 TFPI2P48307 235 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 KLF17Q5JT82 389 aaPredicted RBP11.04□□□□□ -0.64
GPC1-209ENST00000495100 C14orf144Q96I85 54 aa11.04□□□□□ -0.64
GPC1-209ENST00000495100 SEBOXQ9HB31 216 aaPredicted RBP11.04□□□□□ -0.64
GPC1-209ENST00000495100 ELOA3CA0A087WX78 387 aaPredicted RBP11.03□□□□□ -0.64
GPC1-209ENST00000495100 PDE6DO43924 150 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 PFN1P07737 140 aaKnown RBP11.03□□□□□ -0.64
GPC1-209ENST00000495100 GLRXP35754 106 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 JPT1Q9UK76 154 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 PCSK5Q92824 1860 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 TNFRSF1AP19438 455 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 RAB7AP51149 207 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 PKIAP61925 76 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 ARF6P62330 175 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 LRRC10Q5BKY1 277 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 DAZAP1Q96EP5 407 aaKnown RBP11.03□□□□□ -0.64
GPC1-209ENST00000495100 PMCHL2Q9BQD1 86 aa11.03□□□□□ -0.64
GPC1-209ENST00000495100 PPIAL4EA0A075B759 164 aa11.02□□□□□ -0.64
GPC1-209ENST00000495100 ZNF729A6NN14 1252 aaPredicted RBP11.02□□□□□ -0.64
GPC1-209ENST00000495100 PPIAL4DF5H284 164 aa11.02□□□□□ -0.64
GPC1-209ENST00000495100 ZNF883P0CG24 379 aa11.02□□□□□ -0.64
GPC1-209ENST00000495100 PPIAL4FP0DN26 164 aa11.02□□□□□ -0.64
GPC1-209ENST00000495100 RPL8P62917 257 aaKnown RBP11.02□□□□□ -0.64
GPC1-209ENST00000495100 RPEL1Q2QD12 228 aa11.02□□□□□ -0.64
GPC1-209ENST00000495100 C1orf185Q5T7R7 199 aa11.02□□□□□ -0.64
GPC1-209ENST00000495100 MORN5Q5VZ52 161 aa11.02□□□□□ -0.64
GPC1-209ENST00000495100 SEM1Q6ZVN7 128 aa11.02□□□□□ -0.64
GPC1-209ENST00000495100 ANAPC16Q96DE5 110 aa11.02□□□□□ -0.64
GPC1-209ENST00000495100 TRAV8-1A0A0A6YYK1 113 aa11.02□□□□□ -0.65
GPC1-209ENST00000495100 C15orf65H3BRN8 121 aa11.02□□□□□ -0.65
GPC1-209ENST00000495100 CNTFRP26992 372 aa11.02□□□□□ -0.65
GPC1-209ENST00000495100 Q56UQ5 140 aa11.02□□□□□ -0.65
GPC1-209ENST00000495100 ZNF714Q96N38 554 aa11.02□□□□□ -0.65
GPC1-209ENST00000495100 PRO3102Q9H379 93 aa11.02□□□□□ -0.65
GPC1-209ENST00000495100 IDI2-AS1Q9NZ38 188 aa11.02□□□□□ -0.65
GPC1-209ENST00000495100 HSBP1O75506 76 aa11.02□□□□□ -0.65
GPC1-209ENST00000495100 LINC00469Q8N7U9 141 aa11.02□□□□□ -0.65
GPC1-209ENST00000495100 PGPA6NDG6 321 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 E7EUB6 86 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 USF1P22415 310 aaPredicted RBP11.01□□□□□ -0.65
GPC1-209ENST00000495100 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
GPC1-209ENST00000495100 FAM222BQ8WU58 562 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 FBXL15Q9H469 300 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 PRDM13Q9H4Q3 707 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 KMT2EQ8IZD2 1858 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 TRBV6-6A0A0A6YYG2 114 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 J3KRW8 73 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 ZNF25P17030 456 aaPredicted RBP11.01□□□□□ -0.65
GPC1-209ENST00000495100 LMO1P25800 156 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 LCN12Q6JVE5 192 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 ASCL3Q9NQ33 180 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms