RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 FAM57AQ8TBR7 257 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 RNASE7Q9H1E1 156 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 OSTCQ9NRP0 149 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 KIR2DL5BA0A0G2JN68 375 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 KIR2DL5BA0A0G2JPC4 375 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 A0A1W2PRE2 83 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 SNURFLB1AK76 121 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 E7EUB6 86 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 APOA2P02652 100 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 C8orf88P0DMB2 117 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 RPL8P62917 257 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 PAFAH1B2P68402 229 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 TMEM177Q53S58 311 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 MORN5Q5VZ52 161 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 DMRTC2Q8IXT2 367 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 KIR2DL5AQ8N109 375 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 OR2T6Q8NHC8 308 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 CACNG8Q8WXS5 425 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 FAM167A-AS1Q96KT0 104 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 IGF2BP2-AS1Q96M15 143 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 GNB1LQ9BYB4 327 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 COMMD5Q9GZQ3 224 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 TMEM106BQ9NUM4 274 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 TRBV9A0A0B4J1U6 114 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 F2Z2F3 143 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 DLL1O00548 723 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 CRYABP02511 175 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 TNFRSF1AP19438 455 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 CD33P20138 364 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 TPPP2P59282 170 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 SUMO1P63165 101 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 CX3CL1P78423 397 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 TIGITQ495A1 244 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 ZCCHC24Q8N2G6 241 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 C17orf100A8MU93 164 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 INS-IGF2F8WCM5 200 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 EREGO14944 169 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 REG1BP48304 166 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 Q0VG73 95 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 ADIPOQQ15848 244 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 TMEM200BQ69YZ2 307 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 ZNF714Q96N38 554 aa13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 MRPL32Q9BYC8 188 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-220ENST00000492386 TRAV5A0A0B4J249 113 aa13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 PPOXP50336 477 aa13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 SSBP2P81877 361 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 FXYD3Q14802 87 aa13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 USF2Q15853 346 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 TMEM108Q6UXF1 575 aa13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 TBX15Q96SF7 602 aa13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 ARFGEF3Q5TH69 2177 aa13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 CGB1A6NKQ9 187 aa13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 ISLRO14498 428 aa13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 ERHP84090 104 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 FLYWCH2Q96CP2 140 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-220ENST00000492386 MGAQ8IWI9 3026 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 DPRXA6NFQ7 191 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 USF1P22415 310 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 RANP62826 216 aaKnown RBP13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 WT1-ASQ06250 92 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 DIAPH2-AS1Q14236 149 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 TMEM167AQ8TBQ9 72 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 ZNF705FA8MVS1 300 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 SPINK4O60575 86 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 BAGE3Q86Y29 109 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 BAGE2Q86Y30 109 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 WFDC8Q8IUA0 241 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 DNAJC4Q9NNZ3 241 aa13.05□□□□□ -0.32
SEMA4D-220ENST00000492386 NAV3Q8IVL0 2385 aa13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 UBE2L3P68036 154 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 C10orf55Q5SWW7 151 aa13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 TPTE2P1Q5T6R2 138 aa13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 TMEM136Q6ZRR5 245 aa13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 RNF2Q99496 336 aa13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 HSPB9Q9BQS6 159 aa13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 FNDC4Q9H6D8 234 aaPredicted RBP13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 CBLN4Q9NTU7 201 aa13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 CEP250Q9BV73 2442 aa13.04□□□□□ -0.32
SEMA4D-220ENST00000492386 SMIM27A0A1W2PRY6 76 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 IGLV2-23P01705 113 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 TCL1AP56279 114 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 WDR73Q6P4I2 378 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 OR4C13Q8NGP0 309 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 OR4A5Q8NH83 315 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 GNB4Q9HAV0 340 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 NAT8BQ9UHF3 227 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 A0A0G2JNJ9 132 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 A0A1W2PN81 502 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 C16orf97H3BN30 126 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 TMEM178BH3BS89 294 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 MT-ND6P03923 174 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 SLC35B1P78383 322 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 IBA57Q5T440 356 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 TOMM20LQ6UXN7 152 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 OR5AU1Q8NGC0 362 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 SNHG12Q9BXW3 62 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 Q9UFV3 132 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms