RNA–Protein interactions for RNA: ENST00000491990.5

NUP188-209, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 381 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-209ENST00000491990 TMEM116Q8NCL8 245 aa17.15■□□□□ 0.34
NUP188-209ENST00000491990 KIR2DL5BQ8NHK3 375 aa17.15■□□□□ 0.34
NUP188-209ENST00000491990 ZNF414Q96IQ9 312 aa17.15■□□□□ 0.34
NUP188-209ENST00000491990 RNF2Q99496 336 aa17.15■□□□□ 0.34
NUP188-209ENST00000491990 CHEK1O14757 476 aa17.14■□□□□ 0.33
NUP188-209ENST00000491990 SPRY2O43597 315 aa17.14■□□□□ 0.33
NUP188-209ENST00000491990 IGKV1-5P01602 117 aa17.14■□□□□ 0.33
NUP188-209ENST00000491990 SNCAP37840 140 aa17.14■□□□□ 0.33
NUP188-209ENST00000491990 IZUMO4Q1ZYL8 232 aa17.14■□□□□ 0.33
NUP188-209ENST00000491990 STPG3Q8N7X2 389 aa17.14■□□□□ 0.33
NUP188-209ENST00000491990 ZFAND1Q8TCF1 268 aa17.14■□□□□ 0.33
NUP188-209ENST00000491990 TP53RKQ96S44 253 aa17.14■□□□□ 0.33
NUP188-209ENST00000491990 ALMS1Q8TCU4 4167 aa17.14■□□□□ 0.33
NUP188-209ENST00000491990 TRAV14DV4A0A0A6YYC5 116 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 C3orf85A0A1B0GTC6 90 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 IGHV3-48P01763 117 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 SMIM18P0DKX4 95 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 DEFB135Q30KP9 77 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 SPINK9Q5DT21 86 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 GPR107Q5VW38 600 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 SLC35G3Q8N808 338 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 CCDC71LQ8N9Z2 235 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 GALNT14Q96FL9 552 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 ABHD1Q96SE0 405 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 PDCD10Q9BUL8 212 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 C6orf62Q9GZU0 229 aaPredicted RBP17.13■□□□□ 0.33
NUP188-209ENST00000491990 COPZ2Q9P299 210 aa17.13■□□□□ 0.33
NUP188-209ENST00000491990 INS-IGF2F8WCM5 200 aa17.12■□□□□ 0.33
NUP188-209ENST00000491990 IFNA17P01571 189 aa17.12■□□□□ 0.33
NUP188-209ENST00000491990 P0C879 139 aa17.12■□□□□ 0.33
NUP188-209ENST00000491990 NPBWR1P48145 328 aa17.12■□□□□ 0.33
NUP188-209ENST00000491990 PPP5CP53041 499 aa17.12■□□□□ 0.33
NUP188-209ENST00000491990 CMC4P56277 68 aaPredicted RBP17.12■□□□□ 0.33
NUP188-209ENST00000491990 TMEM229BQ8NBD8 167 aa17.12■□□□□ 0.33
NUP188-209ENST00000491990 DUSP18Q8NEJ0 188 aa17.12■□□□□ 0.33
NUP188-209ENST00000491990 TERB2Q8NHR7 220 aa17.12■□□□□ 0.33
NUP188-209ENST00000491990 GINS3Q9BRX5 216 aa17.12■□□□□ 0.33
NUP188-209ENST00000491990 HYDINQ4G0P3 5121 aa17.11■□□□□ 0.33
NUP188-209ENST00000491990 IGHV3-49A0A0A0MS15 119 aa17.11■□□□□ 0.33
NUP188-209ENST00000491990 A0A0B4J293 547 aa17.11■□□□□ 0.33
NUP188-209ENST00000491990 A0A0J9YWU9 116 aa17.11■□□□□ 0.33
NUP188-209ENST00000491990 ST8SIA3O43173 380 aa17.11■□□□□ 0.33
NUP188-209ENST00000491990 CD74P04233 296 aa17.11■□□□□ 0.33
NUP188-209ENST00000491990 RPL35AP18077 110 aaKnown RBP17.11■□□□□ 0.33
NUP188-209ENST00000491990 TAS2R19P59542 299 aa17.11■□□□□ 0.33
NUP188-209ENST00000491990 TNFRSF9Q07011 255 aa17.11■□□□□ 0.33
NUP188-209ENST00000491990 TRIM16LQ309B1 348 aa17.11■□□□□ 0.33
NUP188-209ENST00000491990 B3GALNT1O75752 331 aa17.1■□□□□ 0.33
NUP188-209ENST00000491990 RAB3DO95716 219 aa17.1■□□□□ 0.33
NUP188-209ENST00000491990 CD5P06127 495 aa17.1■□□□□ 0.33
NUP188-209ENST00000491990 SUB1P53999 127 aaKnown RBP eCLIP17.1■□□□□ 0.33
NUP188-209ENST00000491990 SCGB2B2Q4G0G5 96 aa17.1■□□□□ 0.33
NUP188-209ENST00000491990 LYG2Q86SG7 212 aa17.1■□□□□ 0.33
NUP188-209ENST00000491990 OR4D10Q8NGI6 311 aa17.1■□□□□ 0.33
NUP188-209ENST00000491990 RNF183Q96D59 192 aa17.1■□□□□ 0.33
NUP188-209ENST00000491990 EPPK1P58107 5090 aaKnown RBP17.09■□□□□ 0.33
NUP188-209ENST00000491990 GABARAPH6UMI1 98 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 CORTO00230 105 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 TFPI2P48307 235 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 PAFAH1B2P68402 229 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 SP6Q3SY56 376 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 STEAP1BQ6NZ63 245 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 TOMM20LQ6UXN7 152 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 APRG1Q8IVJ8 170 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 OR13C8Q8NGS7 320 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 RRNAD1Q96FB5 475 aaKnown RBP17.09■□□□□ 0.33
NUP188-209ENST00000491990 MAP6D1Q9H9H5 199 aa17.09■□□□□ 0.33
NUP188-209ENST00000491990 IGKV3-7A0A075B6H7 116 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 IGHV3OR16-13A0A075B7E8 117 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 IGHV3-74A0A0B4J1X5 117 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 CXorf65A6NEN9 183 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 RGS5O15539 181 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 UCP1P25874 307 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 HOXA1P49639 335 aaPredicted RBP17.08■□□□□ 0.32
NUP188-209ENST00000491990 MRPS10P82664 201 aaKnown RBP17.08■□□□□ 0.32
NUP188-209ENST00000491990 SSBP1Q04837 148 aaKnown RBP17.08■□□□□ 0.32
NUP188-209ENST00000491990 FAM90A2PQ658T7 463 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 ZNF600Q6ZNG1 722 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 RNASE11Q8TAA1 199 aaKnown RBP17.08■□□□□ 0.32
NUP188-209ENST00000491990 MARCH1Q8TCQ1 289 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 ENY2Q9NPA8 101 aa17.08■□□□□ 0.32
NUP188-209ENST00000491990 ETV6P41212 452 aa17.07■□□□□ 0.32
NUP188-209ENST00000491990 PMS2P11Q13670 270 aa17.07■□□□□ 0.32
NUP188-209ENST00000491990 PVRIGQ6DKI7 326 aa17.07■□□□□ 0.32
NUP188-209ENST00000491990 TCF24Q7RTU0 167 aa17.07■□□□□ 0.32
NUP188-209ENST00000491990 GPR141Q7Z602 305 aa17.07■□□□□ 0.32
NUP188-209ENST00000491990 MIXL1Q9H2W2 232 aa17.07■□□□□ 0.32
NUP188-209ENST00000491990 TMEM50AO95807 157 aa17.06■□□□□ 0.32
NUP188-209ENST00000491990 RNASE2P10153 161 aaKnown RBP17.06■□□□□ 0.32
NUP188-209ENST00000491990 ATF4P18848 351 aaPredicted RBP17.06■□□□□ 0.32
NUP188-209ENST00000491990 MEF2DQ14814 521 aa17.06■□□□□ 0.32
NUP188-209ENST00000491990 GBGT1Q8N5D6 347 aa17.06■□□□□ 0.32
NUP188-209ENST00000491990 MRPS26Q9BYN8 205 aaKnown RBP17.06■□□□□ 0.32
NUP188-209ENST00000491990 VSIRQ9H7M9 311 aa17.06■□□□□ 0.32
NUP188-209ENST00000491990 C14orf166Q9Y224 244 aaKnown RBP17.06■□□□□ 0.32
NUP188-209ENST00000491990 PUS1Q9Y606 427 aaKnown RBP eCLIP17.06■□□□□ 0.32
NUP188-209ENST00000491990 NUPR2A6NF83 97 aa17.05■□□□□ 0.32
NUP188-209ENST00000491990 FAM219AQ8IW50 185 aa17.05■□□□□ 0.32
NUP188-209ENST00000491990 TMEM217Q8N7C4 229 aa17.05■□□□□ 0.32
NUP188-209ENST00000491990 ST8SIA2Q92186 375 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms