RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 Q6ZRN7 208 aaPredicted RBP9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 Q6ZS49 121 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 DMBX1Q8NFW5 382 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 ZNF586Q9NXT0 402 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 ELF5Q9UKW6 265 aaPredicted RBP9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 IRGMA1A4Y4 181 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 F5H768 121 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 SULT1C2O00338 296 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 MT-CO2P00403 227 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 IGKV3-20P01619 116 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 NPPCP23582 126 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 RAB11BQ15907 218 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 C2orf76Q3KRA6 126 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 HSD17B12Q53GQ0 312 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 MOB3AQ96BX8 217 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 CENPOQ9BU64 300 aa9.48□□□□□ -0.89
EXOSC3-207ENST00000490516 TMEM272A0A1B0GTI8 110 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 A0A1W2PS18 150 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 HPRT1P00492 218 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 FGF2P09038 288 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 TALDO1P37837 337 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 PPP5CP53041 499 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 LINC00315P59091 139 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 OGFRL1Q5TC84 451 aaPredicted RBP9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 ZNF600Q6ZNG1 722 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 OR1P1Q8NH06 330 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 RNF141Q8WVD5 230 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 FAM3DQ96BQ1 224 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 UHRF2Q96PU4 802 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 CCL28Q9NRJ3 127 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 NSG2Q9Y328 171 aa9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 AK6Q9Y3D8 172 aaKnown RBP9.47□□□□□ -0.89
EXOSC3-207ENST00000490516 A0A1W2PPQ1 181 aa9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 EREGO14944 169 aa9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 RBFOX2O43251 390 aaKnown RBP eCLIP9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 HBE1P02100 147 aa9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 HIST1H1DP16402 221 aaKnown RBP9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 ALDH3B2P48448 385 aa9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 DEFB1P60022 68 aa9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 GDF5OSQ5U4N7 250 aa9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 OR10R2Q8NGX6 335 aa9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 PINX1Q96BK5 328 aaKnown RBP9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 OR51B2Q9Y5P1 312 aa9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 LRP1Q07954 4544 aaKnown RBP9.46□□□□□ -0.9
EXOSC3-207ENST00000490516 EFCAB10A6NFE3 127 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 DNAH10OSP0CZ25 163 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 CRYBB3P26998 211 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 ERVFC1-1P60608 527 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 ST3GAL4Q11206 333 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 C1orf146Q5VVC0 180 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 C1orf158Q8N1D5 194 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 SECTM1Q8WVN6 248 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
EXOSC3-207ENST00000490516 FAM90A26D6RGX4 464 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 UCHL1P09936 223 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 CTXN2P0C2S0 81 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 DEFB130BP0DP73 79 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 DEFB130AP0DP74 79 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 GADD45AP24522 165 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 WNT4P56705 351 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 RRN3P1Q2M238 152 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 TMEM69Q5SWH9 247 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 MS4A15Q8N5U1 240 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 ZNF709Q8N972 641 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 CCDC197Q8NCU1 140 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 METTL26Q96S19 204 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 RAB22AQ9UL26 194 aa9.44□□□□□ -0.9
EXOSC3-207ENST00000490516 DBX1A6NMT0 343 aa9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 GCSHP23434 173 aa9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 KCTD21Q4G0X4 260 aa9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 OR51H1Q8NH63 302 aa9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 PYDC1Q8WXC3 89 aa9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 TMEM56Q96MV1 263 aa9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 C7orf50Q9BRJ6 194 aaKnown RBP9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 SLC35B3Q9H1N7 401 aa9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 PLEKHA2Q9HB19 425 aa9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 GOLT1BQ9Y3E0 138 aa9.43□□□□□ -0.9
EXOSC3-207ENST00000490516 MARCH11A6NNE9 402 aa9.42□□□□□ -0.9
EXOSC3-207ENST00000490516 MYL12BO14950 172 aa9.42□□□□□ -0.9
EXOSC3-207ENST00000490516 TMEM50AO95807 157 aa9.42□□□□□ -0.9
EXOSC3-207ENST00000490516 PRM2P04554 102 aa9.42□□□□□ -0.9
EXOSC3-207ENST00000490516 DTYMKP23919 212 aa9.42□□□□□ -0.9
EXOSC3-207ENST00000490516 CNIH2Q6PI25 160 aa9.42□□□□□ -0.9
EXOSC3-207ENST00000490516 DEFB104AQ8WTQ1 72 aa9.42□□□□□ -0.9
EXOSC3-207ENST00000490516 NPBWR1P48145 328 aa9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 EIF2B2P49770 351 aaKnown RBP9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 ERVK-16P61578 105 aa9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 CATR1Q13166 79 aa9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 FCN2Q15485 313 aa9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 HES5Q5TA89 166 aa9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 GLMPQ8WWB7 406 aa9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 NARS2Q96I59 477 aaKnown RBP9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 UPK3BQ9BT76 320 aa9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 COMMD9Q9P000 198 aa9.41□□□□□ -0.9
EXOSC3-207ENST00000490516 LYRM9A8MSI8 78 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 ATP5G1P05496 136 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 PTHLHP12272 177 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 ATP5G3P48201 142 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms