RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CD302Q8IX05 232 aa-0.21□□□□□ -2.44
CCDC93-209ENST00000488908 PLPP5Q8NEB5 264 aa-0.21□□□□□ -2.44
CCDC93-209ENST00000488908 EEF1AKMT1Q8WVE0 214 aa-0.21□□□□□ -2.44
CCDC93-209ENST00000488908 SIKE1Q9BRV8 207 aa-0.21□□□□□ -2.44
CCDC93-209ENST00000488908 JPT1Q9UK76 154 aa-0.21□□□□□ -2.44
CCDC93-209ENST00000488908 DKKL1Q9UK85 242 aa-0.21□□□□□ -2.44
CCDC93-209ENST00000488908 CASP8AP2Q9UKL3 1982 aa-0.21□□□□□ -2.44
CCDC93-209ENST00000488908 RALGAPA2Q2PPJ7 1873 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 TRBV20OR9-2A0A075B6H5 130 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 TRAV1-1A0A0B4J248 108 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 TINCRA0A1B0GVN0 87 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 CCDC160A6NGH7 325 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 INMT-MINDY4F8WBC2 141 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 CCL25O15444 150 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 HPGDSO60760 199 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 TCL1BO95988 128 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 DNAL4O96015 105 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 FAM228BP0C875 321 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 PET100P0DJ07 73 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 CRYGAP11844 174 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 CCL1P22362 96 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 CLDN12P56749 244 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 KISS1Q15726 138 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 FAM74A1Q5RGS3 127 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 RPL22L1Q6P5R6 122 aaKnown RBP-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 IQCF2Q8IXL9 164 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 DERL1Q9BUN8 251 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 TLNRD1Q9H1K6 362 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 OR52A5Q9H2C5 316 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 AGPAT3Q9NRZ7 376 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 NHP2Q9NX24 153 aaKnown RBP-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 HS3ST2Q9Y278 367 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 DOCK3Q8IZD9 2030 aa-0.22□□□□□ -2.44
CCDC93-209ENST00000488908 CITO14578 2027 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 STAB1Q9NY15 2570 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 A0A1B0GV50 99 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 ZNF879B4DU55 563 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 K7EIL1 84 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 LYZL6O75951 148 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 BRI3O95415 125 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HLA-DRAP01903 254 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HIST1H2BOP23527 126 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HIST1H2BBP33778 126 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HIST1H2BDP58876 126 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HIST1H2BCP62807 126 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 GRK1Q15835 563 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HIST2H2BEQ16778 126 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 KHDC3LQ587J8 217 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 RNASE10Q5GAN6 216 aaKnown RBP-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 AADACL3Q5VUY0 350 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 KRTAP26-1Q6PEX3 210 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 ATOH7Q8N100 152 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 Q8N402 240 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 C3orf56Q8N813 242 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HIST1H2BHQ93079 126 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 SMIM19Q96E16 107 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 CNBD2Q96M20 576 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 TSPAN32Q96QS1 320 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HIST1H2BNQ99877 126 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 HIST1H2BMQ99879 126 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 XPNPEP1Q9NQW7 623 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 NF1P21359 2839 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 KIAA1549Q9HCM3 1950 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 DCCP43146 1447 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 TOPBP1Q92547 1522 aa-0.23□□□□□ -2.45
CCDC93-209ENST00000488908 IGF2RP11717 2491 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 SETXQ7Z333 2677 aaKnown RBP-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 PDZD2O15018 2839 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 IGLV3-32A0A0A0MS00 114 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 TLCD2A6NGC4 264 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 M0R378 163 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 SSNA1O43805 119 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 RD3LP0DJH9 198 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 MGST1P10620 155 aaKnown RBP-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 UGT2B7P16662 529 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 ZNF137PP52743 207 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 MAP3K7CLP57077 242 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 FXYD6P3P58550 94 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 ANGPT1Q15389 498 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 MIR17HGQ75NE6 70 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 BPIFA4PQ86YQ2 179 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 BOD1L2Q8IYS8 172 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 TMEM161BQ8NDZ6 487 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 OR5A1Q8NGJ0 315 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 OR13C4Q8NGS5 318 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 OR10AC1Q8NH08 325 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 OR10J5Q8NHC4 309 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 TEX47Q8TBZ9 253 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 C19orf60Q96EN9 201 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 DCUN1D5Q9BTE7 237 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 FAM103A1Q9BTL3 118 aaKnown RBP-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 DCSTAMPQ9H295 470 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 SLC35A3Q9Y2D2 325 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 MUC4Q99102 2169 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 TPRP12270 2363 aaKnown RBP-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 SRRM2Q9UQ35 2752 aaKnown RBP-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 KIF13BQ9NQT8 1826 aa-0.24□□□□□ -2.45
CCDC93-209ENST00000488908 CREBBPQ92793 2442 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 OTOGQ6ZRI0 2925 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms