RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	CTRB1	P17538	263 aa		10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	PVALB	P20472	110 aa	Predicted RBP	10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	CTRB2	Q6GPI1	263 aa		10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	TEX38	Q6PEX7	206 aa		10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	ASB13	Q8WXK3	278 aa		10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	RAB40C	Q96S21	281 aa		10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	MCRIP2	Q9BUT9	160 aa	Known RBP	10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	RANGRF	Q9HD47	186 aa	Predicted RBP	10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	PSENEN	Q9NZ42	101 aa		10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	PAIP2B	Q9ULR5	123 aa	Known RBP	10.16	□□□□□ -0.78
NR1H3-223	ENST00000486991	NUDT19	A8MXV4	375 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	SOX15	O60248	233 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	DEDD	O75618	318 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	CRYGC	P07315	174 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	PET100	P0DJ07	73 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	RNASE2	P10153	161 aa	Known RBP	10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	NPY1R	P25929	384 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	PPIF	P30405	207 aa	Known RBP	10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	HOXD3	P31249	432 aa	Predicted RBP	10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	HTR2B	P41595	481 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	SUB1	P53999	127 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	RPL23A	P62750	156 aa	Known RBP	10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	CFHR3	Q02985	330 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	SPANXN5	Q5MJ07	72 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	SLC25A24	Q6NUK1	477 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	ETV3L	Q6ZN32	361 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	AKAP14	Q86UN6	197 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	SLC24A4	Q8NFF2	622 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	OR2T35	Q8NGX2	323 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	SMIM8	Q96KF7	97 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	MS4A10	Q96PG2	267 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	P2RX4	Q99571	388 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	OR5AC2	Q9NZP5	309 aa		10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	ZMAT5	Q9UDW3	170 aa	Known RBP	10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991	F11R	Q9Y624	299 aa	Known RBP	10.15	□□□□□ -0.78
NR1H3-223	ENST00000486991		H0YIZ8	118 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	CYB5B	O43169	146 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	LY86	O95711	162 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	TMEM50A	O95807	157 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	ELANE	P08246	267 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	MYCNOS	P40205	109 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	PAX9	P55771	341 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	RPP30	P78346	268 aa	Known RBP	10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	FGL1	Q08830	312 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	TMEM65	Q6PI78	240 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	C18orf65	Q6ZTR6	163 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	THAP6	Q8TBB0	222 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	DPF1	Q92782	380 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	OR4C12	Q96R67	309 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	STRAP	Q9Y3F4	350 aa	Known RBP	10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991		U3KQ87	197 aa		10.14	□□□□□ -0.79
NR1H3-223	ENST00000486991	TRAV14DV4	A0A0A6YYC5	116 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991		E5RGE8	158 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	SMLR1	H3BR10	107 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	IGLV1-40	P01703	118 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	IGHG4	P01861	327 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	TRGV3	P03979	118 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	OR8U8	P0C7N1	319 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	CAV2	P51636	162 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	MFAP2	P55001	183 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	TAS2R30	P59541	319 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	DEFA5	Q01523	94 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	C2orf83	Q53S99	150 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991		Q5BKY6	102 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	PRSS54	Q6PEW0	395 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	LCNL1	Q6ZST4	164 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	ZNF114	Q8NC26	417 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	OR1L6	Q8NGR2	347 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	OR1P1	Q8NH06	330 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	MISP3	Q96FF7	219 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	ST6GAL2	Q96JF0	529 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	RNF126	Q9BV68	326 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	C11orf1	Q9H5F2	150 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	MBD2	Q9UBB5	411 aa		10.13	□□□□□ -0.79
NR1H3-223	ENST00000486991	FAM24A	A6NFZ4	105 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	C15orf62	A8K5M9	175 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991		H3BUA1	57 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	TSC22D2	O75157	780 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	OR2J3	O76001	311 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	IFNA4	P05014	189 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	HIST1H1B	P16401	226 aa	Known RBP	10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	TPPP2	P59282	170 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	RAB11A	P62491	216 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	FOXE3	Q13461	319 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	BSX	Q3C1V8	233 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	NOXA1	Q86UR1	476 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	RNF152	Q8N8N0	203 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	KLHL30-AS1	Q8NEE0	82 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	TMEM170A	Q8WVE7	144 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	DCUN1D4	Q92564	292 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	FANCD2OS	Q96PS1	177 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	KLK15	Q9H2R5	256 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	FBXL7	Q9UJT9	491 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	DMRT1	Q9Y5R6	373 aa		10.12	□□□□□ -0.79
NR1H3-223	ENST00000486991	IGLV11-55	A0A075B6I3	123 aa		10.11	□□□□□ -0.79
NR1H3-223	ENST00000486991	FXYD6-FXYD2	A0A087WZ82	144 aa		10.11	□□□□□ -0.79
NR1H3-223	ENST00000486991	IGHV3-21	A0A0B4J1V1	117 aa		10.11	□□□□□ -0.79
NR1H3-223	ENST00000486991	NDUFB8	O95169	186 aa		10.11	□□□□□ -0.79
NR1H3-223	ENST00000486991	METTL15P1	P0C7V9	234 aa		10.11	□□□□□ -0.79
NR1H3-223	ENST00000486991	PSMB8	P28062	276 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms