RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 LYG2Q86SG7 212 aa19.02■□□□□ 0.64
HLA-F-227ENST00000485513 GALNT14Q96FL9 552 aa19.02■□□□□ 0.64
HLA-F-227ENST00000485513 KLK11Q9UBX7 282 aa19.02■□□□□ 0.64
HLA-F-227ENST00000485513 PIGPP57054 158 aa19.01■□□□□ 0.63
HLA-F-227ENST00000485513 PMS2P11Q13670 270 aa19.01■□□□□ 0.63
HLA-F-227ENST00000485513 SPINK9Q5DT21 86 aa19.01■□□□□ 0.63
HLA-F-227ENST00000485513 LHFPL1Q86WI0 220 aa19.01■□□□□ 0.63
HLA-F-227ENST00000485513 AP3S1Q92572 193 aa19.01■□□□□ 0.63
HLA-F-227ENST00000485513 RNF183Q96D59 192 aa19.01■□□□□ 0.63
HLA-F-227ENST00000485513 ALMS1Q8TCU4 4167 aa19■□□□□ 0.63
HLA-F-227ENST00000485513 TRAV14DV4A0A0A6YYC5 116 aa19■□□□□ 0.63
HLA-F-227ENST00000485513 IGKV1-5P01602 117 aa19■□□□□ 0.63
HLA-F-227ENST00000485513 CD3DP04234 171 aa19■□□□□ 0.63
HLA-F-227ENST00000485513 APRG1Q8IVJ8 170 aa19■□□□□ 0.63
HLA-F-227ENST00000485513 ARRDC1Q8N5I2 433 aa19■□□□□ 0.63
HLA-F-227ENST00000485513 OR52I2Q8NH67 350 aa19■□□□□ 0.63
HLA-F-227ENST00000485513 TP53RKQ96S44 253 aa19■□□□□ 0.63
HLA-F-227ENST00000485513 C6orf62Q9GZU0 229 aaPredicted RBP19■□□□□ 0.63
HLA-F-227ENST00000485513 TBPP20226 339 aa18.99■□□□□ 0.63
HLA-F-227ENST00000485513 TFPI2P48307 235 aa18.99■□□□□ 0.63
HLA-F-227ENST00000485513 AKR1C2P52895 323 aa18.99■□□□□ 0.63
HLA-F-227ENST00000485513 CMC4P56277 68 aaPredicted RBP18.99■□□□□ 0.63
HLA-F-227ENST00000485513 EWSR1Q01844 656 aaKnown RBP eCLIP18.99■□□□□ 0.63
HLA-F-227ENST00000485513 SLC35G3Q8N808 338 aa18.99■□□□□ 0.63
HLA-F-227ENST00000485513 NAA50Q9GZZ1 169 aaKnown RBP18.99■□□□□ 0.63
HLA-F-227ENST00000485513 MAP6D1Q9H9H5 199 aa18.99■□□□□ 0.63
HLA-F-227ENST00000485513 EXTL2Q9UBQ6 330 aa18.99■□□□□ 0.63
HLA-F-227ENST00000485513 MTFP1Q9UDX5 166 aa18.99■□□□□ 0.63
HLA-F-227ENST00000485513 IGKV3-7A0A075B6H7 116 aa18.98■□□□□ 0.63
HLA-F-227ENST00000485513 ATG12O94817 140 aa18.98■□□□□ 0.63
HLA-F-227ENST00000485513 P0C879 139 aa18.98■□□□□ 0.63
HLA-F-227ENST00000485513 ZNF182P17025 639 aaPredicted RBP18.98■□□□□ 0.63
HLA-F-227ENST00000485513 SNCAP37840 140 aa18.98■□□□□ 0.63
HLA-F-227ENST00000485513 NPBWR1P48145 328 aa18.98■□□□□ 0.63
HLA-F-227ENST00000485513 GINS3Q9BRX5 216 aa18.98■□□□□ 0.63
HLA-F-227ENST00000485513 IGHV3OR16-13A0A075B7E8 117 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 IGHV3-74A0A0B4J1X5 117 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 A0A0B4J293 547 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 C3orf85A0A1B0GTC6 90 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 NUPR2A6NF83 97 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 GABARAPO95166 117 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 PPP5CP53041 499 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 CTF1Q16619 201 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 TOMM20LQ6UXN7 152 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 DUSP18Q8NEJ0 188 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 BIRC6Q9NR09 4857 aa18.97■□□□□ 0.63
HLA-F-227ENST00000485513 INS-IGF2F8WCM5 200 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 ST8SIA3O43173 380 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 IFNA17P01571 189 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 ZNF124Q15973 351 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 FAM90A2PQ658T7 463 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 GBGT1Q8N5D6 347 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 LINC00476Q8WZB0 136 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 ABHD1Q96SE0 405 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 PDCD10Q9BUL8 212 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 COPZ2Q9P299 210 aa18.96■□□□□ 0.63
HLA-F-227ENST00000485513 ATF4P18848 351 aaPredicted RBP18.95■□□□□ 0.62
HLA-F-227ENST00000485513 PAFAH1B2P68402 229 aa18.95■□□□□ 0.62
HLA-F-227ENST00000485513 TRIM16LQ309B1 348 aa18.95■□□□□ 0.62
HLA-F-227ENST00000485513 TCF24Q7RTU0 167 aa18.95■□□□□ 0.62
HLA-F-227ENST00000485513 CCDC71LQ8N9Z2 235 aa18.95■□□□□ 0.62
HLA-F-227ENST00000485513 OR4D10Q8NGI6 311 aa18.95■□□□□ 0.62
HLA-F-227ENST00000485513 TERB2Q8NHR7 220 aa18.95■□□□□ 0.62
HLA-F-227ENST00000485513 ZFAND1Q8TCF1 268 aa18.95■□□□□ 0.62
HLA-F-227ENST00000485513 C15orf40Q8WUR7 153 aa18.95■□□□□ 0.62
HLA-F-227ENST00000485513 CD5P06127 495 aa18.94■□□□□ 0.62
HLA-F-227ENST00000485513 SUB1P53999 127 aaKnown RBP eCLIP18.94■□□□□ 0.62
HLA-F-227ENST00000485513 SP6Q3SY56 376 aa18.94■□□□□ 0.62
HLA-F-227ENST00000485513 ZNF600Q6ZNG1 722 aa18.94■□□□□ 0.62
HLA-F-227ENST00000485513 TMEM217Q8N7C4 229 aa18.94■□□□□ 0.62
HLA-F-227ENST00000485513 TMEM229BQ8NBD8 167 aa18.94■□□□□ 0.62
HLA-F-227ENST00000485513 CSTL1Q9H114 145 aa18.94■□□□□ 0.62
HLA-F-227ENST00000485513 SMIM18P0DKX4 95 aa18.93■□□□□ 0.62
HLA-F-227ENST00000485513 ETV6P41212 452 aa18.93■□□□□ 0.62
HLA-F-227ENST00000485513 HOXA1P49639 335 aaPredicted RBP18.93■□□□□ 0.62
HLA-F-227ENST00000485513 SCGB2B2Q4G0G5 96 aa18.93■□□□□ 0.62
HLA-F-227ENST00000485513 GPR107Q5VW38 600 aa18.93■□□□□ 0.62
HLA-F-227ENST00000485513 CEMP1Q6PRD7 247 aaPredicted RBP18.93■□□□□ 0.62
HLA-F-227ENST00000485513 OR13C8Q8NGS7 320 aa18.93■□□□□ 0.62
HLA-F-227ENST00000485513 ST8SIA2Q92186 375 aa18.93■□□□□ 0.62
HLA-F-227ENST00000485513 RRNAD1Q96FB5 475 aaKnown RBP18.93■□□□□ 0.62
HLA-F-227ENST00000485513 VSIRQ9H7M9 311 aa18.93■□□□□ 0.62
HLA-F-227ENST00000485513 PUS1Q9Y606 427 aaKnown RBP eCLIP18.93■□□□□ 0.62
HLA-F-227ENST00000485513 MPTX1A8MV57 137 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 CORTO00230 105 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 RAB3DO95716 219 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 TMEM50AO95807 157 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 CD74P04233 296 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 RNASE2P10153 161 aaKnown RBP18.92■□□□□ 0.62
HLA-F-227ENST00000485513 UCP1P25874 307 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 TAS2R19P59542 299 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 PVRIGQ6DKI7 326 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 ZFAND3Q9H8U3 227 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 ENY2Q9NPA8 101 aa18.92■□□□□ 0.62
HLA-F-227ENST00000485513 LY6G6CO95867 125 aa18.91■□□□□ 0.62
HLA-F-227ENST00000485513 APOHP02749 345 aaPredicted RBP18.91■□□□□ 0.62
HLA-F-227ENST00000485513 STEAP1BQ6NZ63 245 aa18.91■□□□□ 0.62
HLA-F-227ENST00000485513 RNASE11Q8TAA1 199 aaKnown RBP18.91■□□□□ 0.62
HLA-F-227ENST00000485513 MARCH1Q8TCQ1 289 aa18.91■□□□□ 0.62
HLA-F-227ENST00000485513 A0A0G2JRQ6 117 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms