RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 DCUN1D4Q92564 292 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 DPF1Q92782 380 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 SRSF8Q9BRL6 282 aaKnown RBP9.13□□□□□ -0.95
APTX-227ENST00000485479 MARVELD1Q9BSK0 173 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 PAIP2BQ9ULR5 123 aaKnown RBP9.13□□□□□ -0.95
APTX-227ENST00000485479 IGHV3OR16-8A0A075B7F1 116 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 LINC01619G3V211 115 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 BMPR1BO00238 502 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 WRBO00258 174 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 MT-CO2P00403 227 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 EDN2P20800 178 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 POLR2GP62487 172 aaKnown RBP eCLIP9.13□□□□□ -0.95
APTX-227ENST00000485479 HSD17B13Q7Z5P4 300 aaPredicted RBP9.13□□□□□ -0.95
APTX-227ENST00000485479 OR1P1Q8NH06 330 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 OR52E5Q8NH55 327 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 WDR89Q96FK6 387 aaPredicted RBP9.13□□□□□ -0.95
APTX-227ENST00000485479 USMG5Q96IX5 58 aa9.13□□□□□ -0.95
APTX-227ENST00000485479 MRPL36Q9P0J6 103 aaKnown RBP9.13□□□□□ -0.95
APTX-227ENST00000485479 PEF1Q9UBV8 284 aaKnown RBP9.13□□□□□ -0.95
APTX-227ENST00000485479 C5orf51A6NDU8 294 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 IFNA21P01568 189 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 CLEC3BP05452 202 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 MYCNOSP40205 109 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 DCTN2Q13561 401 aaKnown RBP9.12□□□□□ -0.95
APTX-227ENST00000485479 TATDN3Q17R31 274 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 HAPLN4Q86UW8 402 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 SLC24A4Q8NFF2 622 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 FNDC4Q9H6D8 234 aaPredicted RBP9.12□□□□□ -0.95
APTX-227ENST00000485479 NOTCH1P46531 2555 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 F8W735 103 aaPredicted RBP9.12□□□□□ -0.95
APTX-227ENST00000485479 GOSR2O14653 212 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 SSSCA1O60232 199 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 OR2C1O95371 312 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 BRI3O95415 125 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 PTTG1O95997 202 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 IFNA10P01566 189 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 PRB2P02812 416 aaPredicted RBP9.12□□□□□ -0.95
APTX-227ENST00000485479 HSPB1P04792 205 aaKnown RBP9.12□□□□□ -0.95
APTX-227ENST00000485479 RUNX1Q01196 453 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 ZNF114Q8NC26 417 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 OR4D5Q8NGN0 318 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 ZNF502Q8TBZ5 544 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 EEF1AKMT3Q96AZ1 226 aa9.12□□□□□ -0.95
APTX-227ENST00000485479 RANGRFQ9HD47 186 aaPredicted RBP9.12□□□□□ -0.95
APTX-227ENST00000485479 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.11□□□□□ -0.95
APTX-227ENST00000485479 I3L2K1 104 aa9.11□□□□□ -0.95
APTX-227ENST00000485479 IL5P05113 134 aa9.11□□□□□ -0.95
APTX-227ENST00000485479 HIST1H1BP16401 226 aaKnown RBP9.11□□□□□ -0.95
APTX-227ENST00000485479 ARL3P36405 182 aa9.11□□□□□ -0.95
APTX-227ENST00000485479 OPRK1P41145 380 aa9.11□□□□□ -0.95
APTX-227ENST00000485479 PDLIM3Q53GG5 364 aaPredicted RBP9.11□□□□□ -0.95
APTX-227ENST00000485479 CHRDL1Q9BU40 450 aa9.11□□□□□ -0.95
APTX-227ENST00000485479 HIPK2Q9H2X6 1198 aa9.11□□□□□ -0.95
APTX-227ENST00000485479 THYN1Q9P016 225 aa9.11□□□□□ -0.95
APTX-227ENST00000485479 SYNGR2O43760 224 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 OR8U8P0C7N1 319 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 NPY1RP25929 384 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 NKX2-1P43699 371 aaPredicted RBP9.1□□□□□ -0.95
APTX-227ENST00000485479 RPEL1Q2QD12 228 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 BSXQ3C1V8 233 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 Q56UQ5 140 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 ZBTB8BQ8NAP8 495 aaPredicted RBP9.1□□□□□ -0.95
APTX-227ENST00000485479 GPN1Q9HCN4 374 aaPredicted RBP9.1□□□□□ -0.95
APTX-227ENST00000485479 C21orf62Q9NYP8 219 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 ALG5Q9Y673 324 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 SSNA1O43805 119 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 TMEM50AO95807 157 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 MBPP02686 304 aaPredicted RBP9.1□□□□□ -0.95
APTX-227ENST00000485479 SLC25A6P12236 298 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 HTR2BP41595 481 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 RGS21Q2M5E4 152 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 CXorf58Q96LI9 332 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 OR4C12Q96R67 309 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 PALMDQ9NP74 551 aa9.1□□□□□ -0.95
APTX-227ENST00000485479 RCL1Q9Y2P8 373 aaKnown RBP9.1□□□□□ -0.95
APTX-227ENST00000485479 LSM5Q9Y4Y9 91 aaKnown RBP9.1□□□□□ -0.95
APTX-227ENST00000485479 C15orf62A8K5M9 175 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 INS-IGF2F8WCM5 200 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 OVOL1O14753 267 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 ADMP35318 185 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 KLK9Q2XQG4 91 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 LRRC37A5PQ49AS3 106 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 SPANXN5Q5MJ07 72 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 ACSM6Q6P461 480 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 UNQ9165/PRO28630Q6UXU0 137 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 KLK9Q9UKQ9 250 aa9.09□□□□□ -0.95
APTX-227ENST00000485479 TRBV7-1A0A0A6YYK4 115 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 SEC14L6B5MCN3 397 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 CCNKO75909 580 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 S100A10P60903 97 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 ID3Q02535 119 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 CACNG8Q8WXS5 425 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 PIGBOS1A0A0B4J2F0 54 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 ZNF320A2RRD8 509 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 CYB5BO43169 146 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 TGOLN2O43493 480 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 PRAF2O60831 178 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 SAP30O75446 220 aa9.08□□□□□ -0.96
APTX-227ENST00000485479 IFNA4P05014 189 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms