RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 COX7A1P24310 79 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 GCHFRP30047 84 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 PRRX1P54821 245 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 FABP9Q0Z7S8 132 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 SLC16A13Q7RTY0 426 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 OR8B3Q8NGG8 313 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 OR4P4Q8NGL7 312 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 OR8B2Q96RD0 313 aa10.48□□□□□ -0.73
SEC13-216ENST00000479868 IGHV1-3A0A0C4DH29 117 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 C22orf46C9J442 243 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 LGALS7P47929 136 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 FAM209BQ5JX69 171 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 C1orf122Q6ZSJ8 110 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 C8orf46Q8TAG6 207 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 FAM210BQ96KR6 192 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 FNDC4Q9H6D8 234 aaPredicted RBP10.47□□□□□ -0.73
SEC13-216ENST00000479868 PPP1R14DQ9NXH3 145 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 A0A1W2PPI3 338 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 REG1AP05451 166 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 SSBP2P81877 361 aaPredicted RBP10.47□□□□□ -0.73
SEC13-216ENST00000479868 BEND2Q8NDZ0 799 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 NANPQ8TBE9 248 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 ACY3Q96HD9 319 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 AURKAIP1Q9NWT8 199 aaPredicted RBP10.47□□□□□ -0.73
SEC13-216ENST00000479868 MIOXQ9UGB7 285 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 INSIG2Q9Y5U4 225 aa10.47□□□□□ -0.73
SEC13-216ENST00000479868 IGHV3-48P01763 117 aa10.46□□□□□ -0.73
SEC13-216ENST00000479868 NECAP1Q8NC96 275 aa10.46□□□□□ -0.73
SEC13-216ENST00000479868 OR5T1Q8NG75 326 aa10.46□□□□□ -0.73
SEC13-216ENST00000479868 CACNG8Q8WXS5 425 aa10.46□□□□□ -0.73
SEC13-216ENST00000479868 SLC35E1Q96K37 410 aa10.46□□□□□ -0.73
SEC13-216ENST00000479868 PRORYQ9H606 182 aa10.46□□□□□ -0.73
SEC13-216ENST00000479868 ONECUT1Q9UBC0 465 aa10.46□□□□□ -0.73
SEC13-216ENST00000479868 METTL1Q9UBP6 276 aaKnown RBP10.46□□□□□ -0.73
SEC13-216ENST00000479868 FUT9Q9Y231 359 aa10.46□□□□□ -0.73
SEC13-216ENST00000479868 SCO2A0A1W2PP80 73 aa10.46□□□□□ -0.74
SEC13-216ENST00000479868 A0A1W2PPR1 153 aa10.46□□□□□ -0.74
SEC13-216ENST00000479868 PGPEP1LA6NFU8 196 aa10.46□□□□□ -0.74
SEC13-216ENST00000479868 F6UZH7 168 aa10.46□□□□□ -0.74
SEC13-216ENST00000479868 VENTXO95231 258 aa10.46□□□□□ -0.74
SEC13-216ENST00000479868 RBP4P02753 201 aa10.46□□□□□ -0.74
SEC13-216ENST00000479868 TRGC2P03986 189 aa10.46□□□□□ -0.74
SEC13-216ENST00000479868 GPX4P36969 197 aaPredicted RBP10.46□□□□□ -0.74
SEC13-216ENST00000479868 ZNF124Q15973 351 aa10.46□□□□□ -0.74
SEC13-216ENST00000479868 LINC01551Q86U37 167 aa10.46□□□□□ -0.74
SEC13-216ENST00000479868 ASH1LQ9NR48 2969 aaKnown RBP10.45□□□□□ -0.74
SEC13-216ENST00000479868 TRBV20OR9-2A0A075B6H5 130 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 TRBV24-1A0A075B6N3 115 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 AP4M1O00189 453 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 CLN5O75503 358 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 PFN1P07737 140 aaKnown RBP10.45□□□□□ -0.74
SEC13-216ENST00000479868 PNKDQ8N490 385 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 ZNF114Q8NC26 417 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 LY6G5BQ8NDX9 201 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 TXNDC17Q9BRA2 123 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 ELOVL1Q9BW60 279 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 IGLC7A0M8Q6 106 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 H7BYZ3 331 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 LIPFP07098 398 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 CRYGBP07316 175 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 PRSS8Q16651 343 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 LDLRAD2Q5SZI1 272 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 TEX45Q8NA69 505 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 RNASEH2CQ8TDP1 164 aaKnown RBP10.45□□□□□ -0.74
SEC13-216ENST00000479868 TMEM37Q8WXS4 190 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 RPEQ96AT9 228 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 ZNF503Q96F45 646 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 MRPL36Q9P0J6 103 aaKnown RBP10.45□□□□□ -0.74
SEC13-216ENST00000479868 DOK5Q9P104 306 aa10.45□□□□□ -0.74
SEC13-216ENST00000479868 PIEZO1Q92508 2521 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 ZNF98A6NK75 572 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 MT-CO2P00403 227 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 APELAP0DMC3 54 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 GALR1P47211 349 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 PSG5Q15238 335 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 TNXAQ16473 311 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 UNQ6494/PRO21346Q6UXR6 183 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 C19orf35Q6ZS72 473 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 TIMD4Q96H15 378 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 C12orf57Q99622 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 SIGLEC9Q9Y336 463 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 LY6LH3BQJ8 138 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST1H2BKO60814 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST1H2BJP06899 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 OR5G3P0C626 314 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST1H2BOP23527 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST1H2BBP33778 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.741e-7■■■■■ 110.7
SEC13-216ENST00000479868 HIST1H2BDP58876 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 ARF6P62330 175 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST1H2BCP62807 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST2H2BEQ16778 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.44□□□□□ -0.74
SEC13-216ENST00000479868 RUSC1-AS1Q66K80 236 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HCP5Q6MZN7 132 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 MMD2Q8IY49 270 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 NPIPB3Q92617 1050 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST1H2BHQ93079 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST1H2BNQ99877 126 aa10.44□□□□□ -0.74
SEC13-216ENST00000479868 HIST1H2BMQ99879 126 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms