RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	BCL7B	Q9BQE9	202 aa		11.22	□□□□□ -0.61
CCNL1-222	ENST00000479596	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.22	□□□□□ -0.61
CCNL1-222	ENST00000479596	COPZ2	Q9P299	210 aa		11.22	□□□□□ -0.61
CCNL1-222	ENST00000479596	INS-IGF2	F8WCM5	200 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	CTDSPL	O15194	276 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	ST8SIA3	O43173	380 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	IGHV3-48	P01763	117 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	AKR1C2	P52895	323 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	PVRIG	Q6DKI7	326 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	CCDC71L	Q8N9Z2	235 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	OR4C16	Q8NGL9	310 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	LHFPL5	Q8TAF8	219 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	DIRAS2	Q96HU8	199 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	C20orf24	Q9BUV8	137 aa		11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	SLIRP	Q9GZT3	109 aa	Known RBP	11.21	□□□□□ -0.61
CCNL1-222	ENST00000479596	C15orf62	A8K5M9	175 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596		H3BMQ9	156 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596		K7EMT4	169 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	TSPAN4	O14817	238 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	IL18	Q14116	193 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	MEF2D	Q14814	521 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	TRIM16L	Q309B1	348 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	ZFAND6	Q6FIF0	208 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596		Q6ZRM9	215 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	TXN2	Q99757	166 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	SPAG8	Q99932	426 aa	Predicted RBP	11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	TMEM222	Q9H0R3	208 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	HYDIN	Q4G0P3	5121 aa		11.2	□□□□□ -0.62
CCNL1-222	ENST00000479596	CDS2	O95674	445 aa		11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	OR5AC1	P0C628	307 aa		11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	AKAIN1	P0CW23	69 aa		11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	RPL5	P46777	297 aa	Known RBP	11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	MFAP4	P55083	255 aa		11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	ERH	P84090	104 aa	Known RBP	11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	SURF2	Q15527	256 aa	Predicted RBP	11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	ANKRD55	Q3KP44	614 aa		11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	AARD	Q4LEZ3	155 aa		11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	PINX1	Q96BK5	328 aa	Known RBP	11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	OR10C1	Q96KK4	312 aa		11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	SOST	Q9BQB4	213 aa		11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	NXF2	Q9GZY0	626 aa	Known RBP	11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	NAA60	Q9H7X0	242 aa		11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	GAR1	Q9NY12	217 aa	Known RBP	11.19	□□□□□ -0.62
CCNL1-222	ENST00000479596	ANKRD20A5P	A0PJZ0	165 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	DISC1	C4P0D8	188 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	NUPL2	O15504	423 aa	Known RBP	11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	GSTZ1	O43708	216 aa	Predicted RBP	11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	B3GALNT1	O75752	331 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	ATG12	O94817	140 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	RNASE2	P10153	161 aa	Known RBP	11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	ETV6	P41212	452 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	REL	Q04864	619 aa	Predicted RBP	11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	ODF3L2	Q3SX64	289 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	SLC35G3	Q8N808	338 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	GLYATL2	Q8WU03	294 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	GGTLC1	Q9BX51	225 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	UBQLN2	Q9UHD9	624 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	SMPX	Q9UHP9	88 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	RABL2B	Q9UNT1	228 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	GPR132	Q9UNW8	380 aa		11.18	□□□□□ -0.62
CCNL1-222	ENST00000479596	IGHV7-4-1	A0A0J9YVY3	117 aa		11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	CRYM-AS1	A6NIL9	109 aa		11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	CHEK1	O14757	476 aa		11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	IFNA17	P01571	189 aa		11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	BSX	Q3C1V8	233 aa		11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	SELENOH	Q8IZQ5	122 aa	Known RBP	11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	OR51S1	Q8NGJ8	323 aa		11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	RNF2	Q99496	336 aa		11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	MRPL36	Q9P0J6	103 aa	Known RBP	11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	C14orf166	Q9Y224	244 aa	Known RBP	11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	ALMS1	Q8TCU4	4167 aa		11.17	□□□□□ -0.62
CCNL1-222	ENST00000479596	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	IGHV3-49	A0A0A0MS15	119 aa		11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	TNFSF8	P32971	234 aa		11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	SNCA	P37840	140 aa		11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	HOXA1	P49639	335 aa	Predicted RBP	11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	LAMTOR1	Q6IAA8	161 aa		11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	TOMM20L	Q6UXN7	152 aa		11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	RBPMS	Q93062	196 aa	Known RBP	11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	TMEM230	Q96A57	120 aa		11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	RRNAD1	Q96FB5	475 aa	Known RBP	11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	PRRT1	Q99946	306 aa		11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	RHPN1-AS1	Q9BWJ2	59 aa		11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.16	□□□□□ -0.62
CCNL1-222	ENST00000479596	GNG7	O60262	68 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	YIF1A	O95070	293 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	FAM90A2P	Q658T7	463 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	FAM219A	Q8IW50	185 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	TMEM116	Q8NCL8	245 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	RNASE11	Q8TAA1	199 aa	Known RBP	11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	GPR146	Q96CH1	333 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	OVOL2	Q9BRP0	275 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	PDCD10	Q9BUL8	212 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	ZFAND3	Q9H8U3	227 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	PRR13	Q9NZ81	148 aa		11.15	□□□□□ -0.62
CCNL1-222	ENST00000479596	RSL24D1	Q9UHA3	163 aa	Known RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms