RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 WASHC3Q9Y3C0 194 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 URGCP-MRPS24S4R325 110 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 ARL2-SNX15V9GYD0 113 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 ESPL1Q14674 2120 aa4.79□□□□□ -1.64
ATPAF1-204ENST00000474020 TRBV24-1A0A075B6N3 115 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 TGIF2-C20orf24A0A0A6YYL0 155 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 C5orf52A6NGY3 159 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 RRHO14718 337 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 STAG3L2P0CL84 134 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 STAG3L3P0CL85 134 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 SELLP14151 372 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 CHRNB4P30926 498 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 GPX4P36969 197 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 GALR1P47211 349 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 RND2P52198 227 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 NDUFA6P56556 154 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 FAM3BP58499 235 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 CD81P60033 236 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 RPL8P62917 257 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 HOXA4Q00056 320 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 SRSF2Q01130 221 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 KLRB1Q12918 225 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 ELOBQ15370 118 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 HLA-DRB5Q30154 266 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 C2orf83Q53S99 150 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 FAM53AQ6NSI3 398 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 SPNS3Q6ZMD2 512 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 PQLC2Q6ZP29 291 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 SSX7Q7RTT5 188 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 TMEM144Q7Z5S9 345 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 PRIMA1Q86XR5 153 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 TGIF2LXQ8IUE1 241 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 ABHD12Q8N2K0 398 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 OR1L4Q8NGR5 311 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 Q8WTZ3 238 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 CACNG8Q8WXS5 425 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 LINC00476Q8WZB0 136 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 WFIKKN1Q96NZ8 548 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 PFDN5Q99471 154 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 SSX3Q99909 188 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 SCNM1Q9BWG6 230 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 GGTLC1Q9BX51 225 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 MRPL32Q9BYC8 188 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 DOK5Q9P104 306 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 KAAG1Q9UBP8 84 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 CEP295Q9C0D2 2601 aa4.78□□□□□ -1.64
ATPAF1-204ENST00000474020 PCP4L1A6NKN8 68 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 INS-IGF2F8WCM5 200 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 H0YJW9 148 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 CORTO00230 105 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 DVL1O14640 695 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 PROP1O75360 226 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 EIF3GO75821 320 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 FSTL3O95633 263 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 IGKV1D-33P01593 117 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 IGKV1-33P01594 117 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 RBP4P02753 201 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 FABP1P07148 127 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 SAA1P0DJI8 122 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 ARL14EPLP0DKL9 152 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 CT45A6P0DMU7 189 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 CT45A5P0DMU8 189 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 CT45A7P0DMV0 189 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 SFTPCP11686 197 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 GCHFRP30047 84 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 LGALS7P47929 136 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 UBE2G2P60604 165 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 SELENOTP62341 195 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 RPL23P62829 140 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 LCN2P80188 198 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 SPRNQ5BIV9 151 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 MIC13Q5XKP0 118 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 TCF23Q7RTU1 214 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 SLC16A13Q7RTY0 426 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 C16orf82Q7Z2V1 217 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 PNKDQ8N490 385 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 Q8NA96 180 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 OR8B3Q8NGG8 313 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 OR2T10Q8NGZ9 312 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 TMEM167AQ8TBQ9 72 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 RNASEH2CQ8TDP1 164 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 SSMEM1Q8WWF3 244 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 YPEL4Q96NS1 127 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 OR8B2Q96RD0 313 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 IMMP2LQ96T52 175 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 MGST2Q99735 147 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 MRPL20Q9BYC9 149 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 RAB1BQ9H0U4 201 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 SRD5A3Q9H8P0 318 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 PATZ1Q9HBE1 687 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 FAM30AQ9NZY2 134 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 MIOXQ9UGB7 285 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 FUT9Q9Y231 359 aa4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 LSM4Q9Y4Z0 139 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-204ENST00000474020 URB1O60287 2271 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 TRAV9-1A0A075B6T8 112 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 A0A087X0M5 115 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 TRAV3A0A0B4J244 114 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 TEX50A0A1B0GTY4 177 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 A0A1B0GX30 115 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 368.1 ms