RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 OR10G7Q8NGN6 311 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 FAM103A1Q9BTL3 118 aaKnown RBP14.42□□□□□ -0.1
SMC4-211ENST00000469858 FNDC4Q9H6D8 234 aaPredicted RBP14.42□□□□□ -0.1
SMC4-211ENST00000469858 CR1P17927 2039 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 HBE1P02100 147 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 GATA3P23771 443 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 LOXL1Q08397 574 aaPredicted RBP14.42□□□□□ -0.1
SMC4-211ENST00000469858 TMEM144Q7Z5S9 345 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 CACNG8Q8WXS5 425 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 MISP3Q96FF7 219 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 SLC35E1Q96K37 410 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 SLC25A22Q9H936 323 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 PXMP4Q9Y6I8 212 aa14.42□□□□□ -0.1
SMC4-211ENST00000469858 A0A0U1RQK1 487 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 BTBD17A6NE02 478 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 IGHV3-48P01763 117 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 DEFA4P12838 97 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 M6PRP20645 277 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 GPX4P36969 197 aaPredicted RBP14.41□□□□□ -0.1
SMC4-211ENST00000469858 MFAP2P55001 183 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 FGF8P55075 233 aaPredicted RBP14.41□□□□□ -0.1
SMC4-211ENST00000469858 RAB31Q13636 194 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 GUK1Q16774 197 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 ACOT6Q3I5F7 207 aaPredicted RBP14.41□□□□□ -0.1
SMC4-211ENST00000469858 FAM122CQ6P4D5 195 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 OR2T6Q8NHC8 308 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 ACY3Q96HD9 319 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 EIF5A2Q9GZV4 153 aaKnown RBP14.41□□□□□ -0.1
SMC4-211ENST00000469858 C1RLQ9NZP8 487 aa14.41□□□□□ -0.1
SMC4-211ENST00000469858 IGKV1OR2-108A0A075B7D4 117 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 TMEM218A2RU14 115 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 AVPP01185 164 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 GCSAMLQ5JQS6 135 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 OR1P1Q8NH06 330 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 KCNIP2Q9NS61 270 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 F11RQ9Y624 299 aaKnown RBP14.4□□□□□ -0.1
SMC4-211ENST00000469858 NAV2Q8IVL1 2488 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 CELSR1Q9NYQ6 3014 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 NBPF19A0A087WUL8 3843 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 MAP1LC3B2A6NCE7 125 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 CD5P06127 495 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 CX3CL1P78423 397 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 Q8N9W7 124 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 MBD3L1Q8WWY6 194 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 MBD6Q96DN6 1003 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 Q96MF0 132 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 SRSF8Q9BRL6 282 aaKnown RBP14.4□□□□□ -0.1
SMC4-211ENST00000469858 MAP1LC3BQ9GZQ8 125 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 SLC39A9Q9NUM3 307 aa14.4□□□□□ -0.1
SMC4-211ENST00000469858 APCP25054 2843 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 ABCA1O95477 2261 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 HELZ2Q9BYK8 2649 aaKnown RBP14.39□□□□□ -0.11
SMC4-211ENST00000469858 TRAV1-1A0A0B4J248 108 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 HMGB3O15347 200 aaKnown RBP14.39□□□□□ -0.11
SMC4-211ENST00000469858 SOX15O60248 233 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 YIF1AO95070 293 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 TGFAP01135 160 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 B2MP61769 119 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 ZNF562Q6V9R5 426 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 STPG3Q8N7X2 389 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 ARPC1AQ92747 370 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 PBDC1Q9BVG4 233 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 SCRT1Q9BWW7 348 aa14.39□□□□□ -0.11
SMC4-211ENST00000469858 ACTR3CQ9C0K3 210 aaPredicted RBP14.39□□□□□ -0.11
SMC4-211ENST00000469858 NDPQ00604 133 aa14.38□□□□□ -0.11
SMC4-211ENST00000469858 KLF17Q5JT82 389 aaPredicted RBP14.38□□□□□ -0.11
SMC4-211ENST00000469858 PVRIGQ6DKI7 326 aa14.38□□□□□ -0.11
SMC4-211ENST00000469858 SOX21Q9Y651 276 aaPredicted RBP14.38□□□□□ -0.11
SMC4-211ENST00000469858 CSMD1Q96PZ7 3565 aa14.38□□□□□ -0.11
SMC4-211ENST00000469858 CTXND1A0A1B0GTU2 59 aa14.38□□□□□ -0.11
SMC4-211ENST00000469858 C9JQL5 133 aa14.38□□□□□ -0.11
SMC4-211ENST00000469858 OR10J1P30954 320 aa14.38□□□□□ -0.11
SMC4-211ENST00000469858 HAGHQ16775 308 aa14.38□□□□□ -0.11
SMC4-211ENST00000469858 RASL11BQ9BPW5 248 aa14.38□□□□□ -0.11
SMC4-211ENST00000469858 MRPL36Q9P0J6 103 aaKnown RBP14.38□□□□□ -0.11
SMC4-211ENST00000469858 DMRT1Q9Y5R6 373 aa14.38□□□□□ -0.11
SMC4-211ENST00000469858 CORTO00230 105 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 CYB5BO43169 146 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 APOC3P02656 99 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 ADCYAP1P18509 176 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 RPL29P47914 159 aaKnown RBP14.37□□□□□ -0.11
SMC4-211ENST00000469858 CDC34P49427 236 aaPredicted RBP14.37□□□□□ -0.11
SMC4-211ENST00000469858 PEA15Q15121 130 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 KRTAP1-3Q8IUG1 177 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 CCDC28AQ8IWP9 274 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 NPIPB3Q92617 1050 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 RAB24Q969Q5 203 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 RARRES2Q99969 163 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 WNT10AQ9GZT5 417 aa14.37□□□□□ -0.11
SMC4-211ENST00000469858 IGHV3-21A0A0B4J1V1 117 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 RBFOX3A6NFN3 312 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 SFTA3P0C7M3 94 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 IGHV4-31P0DP07 118 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 CTRB1P17538 263 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 RND2P52198 227 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 CTRB2Q6GPI1 263 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 ETFRF1Q6IPR1 90 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 SLC25A33Q9BSK2 321 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 MEGF9Q9H1U4 602 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 GNG13Q9P2W3 67 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms