RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 C2orf83Q53S99 150 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 C9orf152Q5JTZ5 239 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 SPANXN5Q5MJ07 72 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 UNQ5815/PRO19632Q6UWF5 114 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 C10orf99Q6UWK7 81 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 HSD17B13Q7Z5P4 300 aaPredicted RBP4.65□□□□□ -1.67
USP39-213ENST00000467885 SLC35E3Q7Z769 313 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 NOXA1Q86UR1 476 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 PRIMA1Q86XR5 153 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 STPG2Q8N412 459 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 LINC01006Q8NI28 216 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 GRPEL2Q8TAA5 225 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 THAP6Q8TBB0 222 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 HYLS1Q96M11 299 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 CIB3Q96Q77 187 aaPredicted RBP4.65□□□□□ -1.67
USP39-213ENST00000467885 JMJD8Q96S16 334 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 NPFFR1Q9GZQ6 430 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 KLK15Q9H2R5 256 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 WFDC1Q9HC57 220 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 TNFSF18Q9UNG2 199 aa4.65□□□□□ -1.67
USP39-213ENST00000467885 F8P00451 2351 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 IGLV11-55A0A075B6I3 123 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 TMEM238LA0A1B0GVL6 79 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 IGSF23A1L1A6 192 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 RNF222A6NCQ9 220 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 I3L2K1 104 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 SSSCA1O60232 199 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 CST7O76096 145 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 NDUFB8O95169 186 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 NDUFA7O95182 113 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 IFNA10P01566 189 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 IGHG4P01861 327 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 CRYBA1P05813 215 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 PVALBP20472 110 aaPredicted RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 MDKP21741 143 aaPredicted RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 GPX4P36969 197 aaPredicted RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 SNCAP37840 140 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 S100A10P60903 97 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 RPL23AP62750 156 aaKnown RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 TCTEX1D4Q5JR98 221 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 SLC25A24Q6NUK1 477 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 ETV3LQ6ZN32 361 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 ACOT7LQ6ZUV0 252 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 CENPVQ7Z7K6 275 aaPredicted RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 ZNF329Q86UD4 541 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 ZNF114Q8NC26 417 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 OR1P1Q8NH06 330 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 FAM110DQ8TAY7 271 aaPredicted RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 PPP1R14BQ96C90 147 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 AQP10Q96PS8 301 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 FNDC4Q9H6D8 234 aaPredicted RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 PLEKHA3Q9HB20 300 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 PARP11Q9NR21 331 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 CYTL1Q9NRR1 136 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 LYRM2Q9NU23 88 aaPredicted RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 MBD2Q9UBB5 411 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 STRAPQ9Y3F4 350 aaKnown RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 F11RQ9Y624 299 aaKnown RBP4.64□□□□□ -1.67
USP39-213ENST00000467885 MAST4O15021 2626 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 TNCP24821 2201 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 MTORP42345 2549 aa4.64□□□□□ -1.67
USP39-213ENST00000467885 TMEM89A2RUT3 159 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 H3BP45 60 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 K7EIM0 57 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 L7N2F9 121 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 METTL15P1P0C7V9 234 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 PSMB8P28062 276 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 S100A11P31949 105 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 HOXA1P49639 335 aaPredicted RBP4.63□□□□□ -1.67
USP39-213ENST00000467885 EIF2B2P49770 351 aaKnown RBP4.63□□□□□ -1.67
USP39-213ENST00000467885 SULT1A1P50225 295 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 RAB9AP51151 201 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 SUB1P53999 127 aaKnown RBP eCLIP4.63□□□□□ -1.67
USP39-213ENST00000467885 KRTAP10-3P60369 221 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 VAMP2P63027 116 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 RPP30P78346 268 aaKnown RBP4.63□□□□□ -1.67
USP39-213ENST00000467885 EWSR1Q01844 656 aaKnown RBP eCLIP4.63□□□□□ -1.67
USP39-213ENST00000467885 GAMTQ14353 236 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 TMEM95Q3KNT9 176 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 KCNRGQ8N5I3 272 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 RNF152Q8N8N0 203 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 SLC24A4Q8NFF2 622 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 OR1L6Q8NGR2 347 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 OR2T6Q8NHC8 308 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 RNASEH2CQ8TDP1 164 aaKnown RBP4.63□□□□□ -1.67
USP39-213ENST00000467885 CACNG8Q8WXS5 425 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 MS4A10Q96PG2 267 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 MFFQ9GZY8 342 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 SLC25A31Q9H0C2 315 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 ENY2Q9NPA8 101 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 MRPL36Q9P0J6 103 aaKnown RBP4.63□□□□□ -1.67
USP39-213ENST00000467885 NSD1Q96L73 2696 aaPredicted RBP4.63□□□□□ -1.67
USP39-213ENST00000467885 PLXNB1O43157 2135 aa4.63□□□□□ -1.67
USP39-213ENST00000467885 FBN1P35555 2871 aaKnown RBP4.62□□□□□ -1.67
USP39-213ENST00000467885 FXYD6-FXYD2A0A087WZ82 144 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 A0A0D9SG52 128 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 CLPSL1A2RUU4 121 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 ARPC5O15511 151 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 OR2J3O76001 311 aa4.62□□□□□ -1.67
USP39-213ENST00000467885 MT-CO2P00403 227 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms