RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 IGHV4-39P01824 125 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 HTR1DP28221 377 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 TPTE2P1Q5T6R2 138 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 MALSU1Q96EH3 234 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 ODF3BA8MYP8 253 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 INS-IGF2F8WCM5 200 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 OR2C1O95371 312 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 CRYGBP07316 175 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 WT1-ASQ06250 92 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 TEX45Q8NA69 505 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 OR4F5Q8NH21 305 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 OR4F4Q96R69 305 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 KCNIP2Q9NS61 270 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 DPM3Q9P2X0 92 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 SVEP1Q4LDE5 3571 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 FNDC10F2Z333 226 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 ATP5IP56385 69 aaPredicted RBP14.66□□□□□ -0.06
COL9A3-205ENST00000466192 LCN2P80188 198 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 PAX2Q02962 417 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 PSG5Q15238 335 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 C1orf122Q6ZSJ8 110 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 LHFPL4Q7Z7J7 247 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 ABHD5Q8WTS1 349 aa14.66□□□□□ -0.06
COL9A3-205ENST00000466192 IGKV1OR2-108A0A075B7D4 117 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 A0A1W2PN81 502 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 CLN5O75503 358 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 GOSR1O95249 250 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 CHRNA7P36544 502 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 LMO4P61968 165 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 GAMTQ14353 236 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 ZNF674Q2M3X9 581 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 VMO1Q7Z5L0 202 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 ZNF843Q8N446 348 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 KIR3DL3Q8N743 410 aa14.65□□□□□ -0.06
COL9A3-205ENST00000466192 A0A1W2PRD5 423 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 A0A1W2PRF3 423 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 A0A1W2PRM7 423 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 TIMM23O14925 209 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 ARL14EPLP0DKL9 152 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 RPL29P47914 159 aaKnown RBP14.64□□□□□ -0.07
COL9A3-205ENST00000466192 PRSS8Q16651 343 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 TMEM144Q7Z5S9 345 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 RPUSD4Q96CM3 377 aaKnown RBP14.64□□□□□ -0.07
COL9A3-205ENST00000466192 SEPSECSQ9HD40 501 aaKnown RBP14.64□□□□□ -0.07
COL9A3-205ENST00000466192 SIGLEC9Q9Y336 463 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 HILPDAQ9Y5L2 63 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 UBE2G2P60604 165 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 SMIM7Q9BQ49 75 aa14.64□□□□□ -0.07
COL9A3-205ENST00000466192 PRR20EP86478 221 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 PRR20CP86479 221 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 PRR20DP86480 221 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 PRR20BP86481 221 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 PRR20AP86496 221 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 CD69Q07108 199 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 MMD2Q8IY49 270 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 SDF2L1Q9HCN8 221 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 DMRT1Q9Y5R6 373 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 UBR5O95071 2799 aaPredicted RBP14.63□□□□□ -0.07
COL9A3-205ENST00000466192 SPG11Q96JI7 2443 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 A0A087WWC5 75 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 C11orf94C9JXX5 98 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 TMEM250H0YL14 139 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 AP4M1O00189 453 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 REG1AP05451 166 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 STAG3L2P0CL84 134 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 STAG3L3P0CL85 134 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 RAB5AP20339 215 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 MAS1LP35410 378 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 SPATA31B1PQ5VZV4 182 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 CFHR4Q92496 578 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 CCL19Q99731 98 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 SIRPDQ9H106 197 aa14.63□□□□□ -0.07
COL9A3-205ENST00000466192 ABCA2Q9BZC7 2435 aa14.62□□□□□ -0.07
COL9A3-205ENST00000466192 NDUFS6O75380 124 aaKnown RBP14.62□□□□□ -0.07
COL9A3-205ENST00000466192 VENTXO95231 258 aa14.62□□□□□ -0.07
COL9A3-205ENST00000466192 GATA2P23769 480 aaPredicted RBP14.62□□□□□ -0.07
COL9A3-205ENST00000466192 CEACAM3P40198 252 aa14.62□□□□□ -0.07
COL9A3-205ENST00000466192 PNRC1Q12796 327 aaPredicted RBP14.62□□□□□ -0.07
COL9A3-205ENST00000466192 TMEM249Q2WGJ8 235 aa14.62□□□□□ -0.07
COL9A3-205ENST00000466192 SPNS3Q6ZMD2 512 aa14.62□□□□□ -0.07
COL9A3-205ENST00000466192 SPOCK3Q9BQ16 436 aa14.62□□□□□ -0.07
COL9A3-205ENST00000466192 SLC45A2Q9UMX9 530 aa14.62□□□□□ -0.07
COL9A3-205ENST00000466192 CSMD1Q96PZ7 3565 aa14.62□□□□□ -0.07
COL9A3-205ENST00000466192 IGHV2-70DA0A0C4DH43 119 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 LINC00869P0C866 280 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 HOXB4P17483 251 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-205ENST00000466192 OR10J1P30954 320 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 TNXAQ16473 311 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 CST9LP1Q5W188 147 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 PPP1R27Q86WC6 154 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 C1QL4Q86Z23 238 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 OR2T6Q8NHC8 308 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 ACY3Q96HD9 319 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 PARLQ9H300 379 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 FBXL15Q9H469 300 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 URGCP-MRPS24S4R325 110 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 ACTL6BO94805 426 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 CXorf1O96002 111 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 PDLIM4P50479 330 aa14.61□□□□□ -0.07
COL9A3-205ENST00000466192 RHOBP62745 196 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms