RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ADAMTSL5Q6ZMM2 481 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 GPHB5Q86YW7 130 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 LGI3Q8N145 548 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 CENPSQ8N2Z9 138 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 CACNG8Q8WXS5 425 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 PINX1Q96BK5 328 aaKnown RBP9.8□□□□□ -0.84
COL5A1-206ENST00000465877 GPR146Q96CH1 333 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 ATP6V0BQ99437 205 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 ENY2Q9NPA8 101 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.8□□□□□ -0.84
COL5A1-206ENST00000465877 SHPKQ9UHJ6 478 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 LSM4Q9Y4Z0 139 aaKnown RBP9.8□□□□□ -0.84
COL5A1-206ENST00000465877 IGHV3-35A0A0C4DH35 117 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 LINC00854A0A1B0GVQ3 168 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 DUXBA0A1W2PPF3 345 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 TMEM213A2RRL7 107 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 C2orf70A6NJV1 201 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 I3L2K1 104 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 NDUFB6O95139 128 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 NXPH3O95157 252 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 MT-CO2P00403 227 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 RNASE2P10153 161 aaKnown RBP9.79□□□□□ -0.84
COL5A1-206ENST00000465877 SNCAP37840 140 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 PPP1R1AQ13522 171 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 CNPY1Q3B7I2 92 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 FAM106AQ4KMX7 169 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 Q56UQ5 140 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 LCN12Q6JVE5 192 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 SPSB3Q6PJ21 355 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 UNQ9165/PRO28630Q6UXU0 137 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 LYZL2Q7Z4W2 148 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 OR52E5Q8NH55 327 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 DYNLRB2Q8TF09 96 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 TMEM190Q8WZ59 177 aa9.79□□□□□ -0.84
COL5A1-206ENST00000465877 C7orf50Q9BRJ6 194 aaKnown RBP9.79□□□□□ -0.84
COL5A1-206ENST00000465877 PIGBOS1A0A0B4J2F0 54 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 ZNF320A2RRD8 509 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 A6NHS1 94 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 CORTO00230 105 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 FOLR2P14207 255 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
COL5A1-206ENST00000465877 ADMP35318 185 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 UBE2MP61081 183 aaKnown RBP9.78□□□□□ -0.84
COL5A1-206ENST00000465877 CD69Q07108 199 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 SMCO1Q147U7 214 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 BSXQ3C1V8 233 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 OR2K2Q8NGT1 345 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 B9D2Q9BPU9 175 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 CHRDL1Q9BU40 450 aa9.78□□□□□ -0.84
COL5A1-206ENST00000465877 ZNF436Q9C0F3 470 aaPredicted RBP9.78□□□□□ -0.84
COL5A1-206ENST00000465877 IZUMO1RA6ND01 250 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 CENPXA8MT69 81 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 CEBPZOSA8MTT3 80 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 SFT2D2O95562 160 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 IGHV3-48P01763 117 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 SUB1P53999 127 aaKnown RBP eCLIP9.77□□□□□ -0.85
COL5A1-206ENST00000465877 ANKRD55Q3KP44 614 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 PVRIGQ6DKI7 326 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 LINC00299Q6ZSB3 139 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 LRTM2Q8N967 370 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 CCDC32Q9BV29 185 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 PALMDQ9NP74 551 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.85
COL5A1-206ENST00000465877 GAR1Q9NY12 217 aaKnown RBP9.77□□□□□ -0.85
COL5A1-206ENST00000465877 SMAD5-AS1Q9Y6J3 95 aa9.77□□□□□ -0.85
COL5A1-206ENST00000465877 NDUFA4O00483 81 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 OPRK1P41145 380 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 HTR2BP41595 481 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 MFAP4P55083 255 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 TNFRSF9Q07011 255 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 CD300EQ496F6 205 aaPredicted RBP9.76□□□□□ -0.85
COL5A1-206ENST00000465877 TM4SF20Q53R12 229 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 C11orf87Q6NUJ2 197 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 SLC24A4Q8NFF2 622 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 ZNF414Q96IQ9 312 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 TXN2Q99757 166 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 PTTG2Q9NZH5 202 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 CACFD1Q9UGQ2 172 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 UFC1Q9Y3C8 167 aa9.76□□□□□ -0.85
COL5A1-206ENST00000465877 NUPL2O15504 423 aaKnown RBP9.75□□□□□ -0.85
COL5A1-206ENST00000465877 LYRM1O43325 122 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 GNG7O60262 68 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 CTSGP08311 255 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 CBLN1P23435 193 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 ELLP55199 621 aaPredicted RBP9.75□□□□□ -0.85
COL5A1-206ENST00000465877 RELQ04864 619 aaPredicted RBP9.75□□□□□ -0.85
COL5A1-206ENST00000465877 BTNL8Q6UX41 500 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 OR1S1Q8NH92 325 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 S100ZQ8WXG8 99 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 C20orf85Q9H1P6 137 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 DAZ1Q9NQZ3 744 aaKnown RBP9.75□□□□□ -0.85
COL5A1-206ENST00000465877 TECRQ9NZ01 308 aaKnown RBP9.75□□□□□ -0.85
COL5A1-206ENST00000465877 MLXQ9UH92 298 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 FLVCR2Q9UPI3 526 aa9.75□□□□□ -0.85
COL5A1-206ENST00000465877 IGHV3OR16-8A0A075B7F1 116 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 A0A1B0GU03 582 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 PLA2G10O15496 165 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 ANXA7P20073 488 aaKnown RBP9.74□□□□□ -0.85
COL5A1-206ENST00000465877 NPY1RP25929 384 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms