RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 OR11H12B2RN74 326 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 ST8SIA3O43173 380 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 CTSGP08311 255 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 AKR1C2P52895 323 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 MEF2DQ14814 521 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 TRIM16LQ309B1 348 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 Q56UQ5 140 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 SPSB3Q6PJ21 355 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 LHFPL5Q8TAF8 219 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 MUC7Q8TAX7 377 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 MARC2Q969Z3 335 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 ATP6V0BQ99437 205 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 C5orf66Q9H5L9 145 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 RETNQ9HD89 108 aa16.32■□□□□ 0.2
LIME1-203ENST00000465591 MRPL27Q9P0M9 148 aaKnown RBP16.32■□□□□ 0.2
LIME1-203ENST00000465591 OR5AC1P0C628 307 aa16.31■□□□□ 0.2
LIME1-203ENST00000465591 AKAIN1P0CW23 69 aa16.31■□□□□ 0.2
LIME1-203ENST00000465591 Q6ZRM9 215 aa16.31■□□□□ 0.2
LIME1-203ENST00000465591 LINC00299Q6ZSB3 139 aa16.31■□□□□ 0.2
LIME1-203ENST00000465591 CITED4Q96RK1 184 aa16.31■□□□□ 0.2
LIME1-203ENST00000465591 SPATA25Q9BR10 227 aa16.31■□□□□ 0.2
LIME1-203ENST00000465591 SRD5A3Q9H8P0 318 aa16.31■□□□□ 0.2
LIME1-203ENST00000465591 DYNC2H1Q8NCM8 4307 aaKnown RBP16.3■□□□□ 0.2
LIME1-203ENST00000465591 DISC1C4P0D8 188 aa16.3■□□□□ 0.2
LIME1-203ENST00000465591 C3orf84H3BNL1 204 aa16.3■□□□□ 0.2
LIME1-203ENST00000465591 NDUFA4O00483 81 aa16.3■□□□□ 0.2
LIME1-203ENST00000465591 ZNF207O43670 478 aaKnown RBP16.3■□□□□ 0.2
LIME1-203ENST00000465591 MT-CO2P00403 227 aa16.3■□□□□ 0.2
LIME1-203ENST00000465591 GLYATL2Q8WU03 294 aa16.3■□□□□ 0.2
LIME1-203ENST00000465591 EDA2RQ9HAV5 297 aa16.3■□□□□ 0.2
LIME1-203ENST00000465591 PTTG2Q9NZH5 202 aa16.3■□□□□ 0.2
LIME1-203ENST00000465591 GPR132Q9UNW8 380 aa16.3■□□□□ 0.2
LIME1-203ENST00000465591 ANKRD20A5PA0PJZ0 165 aa16.29■□□□□ 0.2
LIME1-203ENST00000465591 OR51S1Q8NGJ8 323 aa16.29■□□□□ 0.2
LIME1-203ENST00000465591 C20orf24Q9BUV8 137 aa16.29■□□□□ 0.2
LIME1-203ENST00000465591 TMEM222Q9H0R3 208 aa16.29■□□□□ 0.2
LIME1-203ENST00000465591 NAA60Q9H7X0 242 aa16.29■□□□□ 0.2
LIME1-203ENST00000465591 DAZ1Q9NQZ3 744 aaKnown RBP16.29■□□□□ 0.2
LIME1-203ENST00000465591 C14orf166Q9Y224 244 aaKnown RBP16.29■□□□□ 0.2
LIME1-203ENST00000465591 CDS2O95674 445 aa16.28■□□□□ 0.2
LIME1-203ENST00000465591 FCGR2BP31994 310 aaPredicted RBP16.28■□□□□ 0.2
LIME1-203ENST00000465591 AP3S2P59780 193 aa16.28■□□□□ 0.2
LIME1-203ENST00000465591 ERHP84090 104 aaKnown RBP16.28■□□□□ 0.2
LIME1-203ENST00000465591 SURF2Q15527 256 aaPredicted RBP16.28■□□□□ 0.2
LIME1-203ENST00000465591 ZNF79Q15937 498 aa16.28■□□□□ 0.2
LIME1-203ENST00000465591 OR52B4Q8NGK2 314 aa16.28■□□□□ 0.2
LIME1-203ENST00000465591 PINX1Q96BK5 328 aaKnown RBP16.28■□□□□ 0.2
LIME1-203ENST00000465591 HIPK2Q9H2X6 1198 aa16.28■□□□□ 0.2
LIME1-203ENST00000465591 TRAV25A0A0B4J276 109 aa16.27■□□□□ 0.2
LIME1-203ENST00000465591 INS-IGF2F8WCM5 200 aa16.27■□□□□ 0.2
LIME1-203ENST00000465591 IFNA17P01571 189 aa16.27■□□□□ 0.2
LIME1-203ENST00000465591 MFAP4P55083 255 aa16.27■□□□□ 0.2
LIME1-203ENST00000465591 CASC10Q5T4H9 136 aa16.27■□□□□ 0.2
LIME1-203ENST00000465591 SLC16A13Q7RTY0 426 aa16.27■□□□□ 0.2
LIME1-203ENST00000465591 SLC35G3Q8N808 338 aa16.27■□□□□ 0.2
LIME1-203ENST00000465591 TEX13DA0A0J9YY54 714 aaPredicted RBP16.26■□□□□ 0.19
LIME1-203ENST00000465591 CRYM-AS1A6NIL9 109 aa16.26■□□□□ 0.19
LIME1-203ENST00000465591 B3GALNT1O75752 331 aa16.26■□□□□ 0.19
LIME1-203ENST00000465591 ATG12O94817 140 aa16.26■□□□□ 0.19
LIME1-203ENST00000465591 RNASE2P10153 161 aaKnown RBP16.26■□□□□ 0.19
LIME1-203ENST00000465591 PVRIGQ6DKI7 326 aa16.26■□□□□ 0.19
LIME1-203ENST00000465591 RBPMS2Q6ZRY4 209 aaKnown RBP16.26■□□□□ 0.19
LIME1-203ENST00000465591 SELENOHQ8IZQ5 122 aaKnown RBP16.26■□□□□ 0.19
LIME1-203ENST00000465591 TMEM230Q96A57 120 aa16.26■□□□□ 0.19
LIME1-203ENST00000465591 RRNAD1Q96FB5 475 aaKnown RBP16.26■□□□□ 0.19
LIME1-203ENST00000465591 FAM110AQ9BQ89 295 aa16.26■□□□□ 0.19
LIME1-203ENST00000465591 SRRQ9GZT4 340 aa16.26■□□□□ 0.19
LIME1-203ENST00000465591 STARD9Q9P2P6 4700 aa16.26■□□□□ 0.19
LIME1-203ENST00000465591 K7EMT4 169 aa16.25■□□□□ 0.19
LIME1-203ENST00000465591 NUPL2O15504 423 aaKnown RBP16.25■□□□□ 0.19
LIME1-203ENST00000465591 FAUP35544 74 aaKnown RBP16.25■□□□□ 0.19
LIME1-203ENST00000465591 INPP1P49441 399 aa16.25■□□□□ 0.19
LIME1-203ENST00000465591 TOMM5Q8N4H5 51 aa16.25■□□□□ 0.19
LIME1-203ENST00000465591 RNASE11Q8TAA1 199 aaKnown RBP16.25■□□□□ 0.19
LIME1-203ENST00000465591 S100ZQ8WXG8 99 aa16.25■□□□□ 0.19
LIME1-203ENST00000465591 TXN2Q99757 166 aa16.25■□□□□ 0.19
LIME1-203ENST00000465591 PRRT1Q99946 306 aa16.25■□□□□ 0.19
LIME1-203ENST00000465591 PRR13Q9NZ81 148 aa16.25■□□□□ 0.19
LIME1-203ENST00000465591 CSMD3Q7Z407 3707 aa16.25■□□□□ 0.19
LIME1-203ENST00000465591 C15orf62A8K5M9 175 aa16.24■□□□□ 0.19
LIME1-203ENST00000465591 SNCAP37840 140 aa16.24■□□□□ 0.19
LIME1-203ENST00000465591 HOXA1P49639 335 aaPredicted RBP16.24■□□□□ 0.19
LIME1-203ENST00000465591 AARDQ4LEZ3 155 aa16.24■□□□□ 0.19
LIME1-203ENST00000465591 TRIQKQ629K1 86 aa16.24■□□□□ 0.19
LIME1-203ENST00000465591 DEDD2Q8WXF8 326 aa16.24■□□□□ 0.19
LIME1-203ENST00000465591 RBPMSQ93062 196 aaKnown RBP16.24■□□□□ 0.19
LIME1-203ENST00000465591 GPR146Q96CH1 333 aa16.24■□□□□ 0.19
LIME1-203ENST00000465591 GAR1Q9NY12 217 aaKnown RBP16.24■□□□□ 0.19
LIME1-203ENST00000465591 MRPL36Q9P0J6 103 aaKnown RBP16.24■□□□□ 0.19
LIME1-203ENST00000465591 IGHV3-49A0A0A0MS15 119 aa16.23■□□□□ 0.19
LIME1-203ENST00000465591 TSPAN4O14817 238 aa16.23■□□□□ 0.19
LIME1-203ENST00000465591 RELQ04864 619 aaPredicted RBP16.23■□□□□ 0.19
LIME1-203ENST00000465591 ANKRD55Q3KP44 614 aa16.23■□□□□ 0.19
LIME1-203ENST00000465591 TMEM268Q5VZI3 342 aa16.23■□□□□ 0.19
LIME1-203ENST00000465591 TRIM63Q969Q1 353 aa16.23■□□□□ 0.19
LIME1-203ENST00000465591 OR10C1Q96KK4 312 aa16.23■□□□□ 0.19
LIME1-203ENST00000465591 SPAG8Q99932 426 aaPredicted RBP16.23■□□□□ 0.19
LIME1-203ENST00000465591 PDCD10Q9BUL8 212 aa16.23■□□□□ 0.19
LIME1-203ENST00000465591 FNDC4Q9H6D8 234 aaPredicted RBP16.23■□□□□ 0.19
LIME1-203ENST00000465591 UBQLN2Q9UHD9 624 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms