RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 IGHV3-48P01763 117 aa16.73■□□□□ 0.27
USP42-205ENST00000465073 LGALS9CQ6DKI2 356 aa16.73■□□□□ 0.27
USP42-205ENST00000465073 GBGT1Q8N5D6 347 aa16.73■□□□□ 0.27
USP42-205ENST00000465073 PINX1Q96BK5 328 aaKnown RBP16.73■□□□□ 0.27
USP42-205ENST00000465073 YIPF6Q96EC8 236 aa16.73■□□□□ 0.27
USP42-205ENST00000465073 EIF4EP06730 217 aaKnown RBP16.72■□□□□ 0.27
USP42-205ENST00000465073 LSM3P62310 102 aaKnown RBP16.72■□□□□ 0.27
USP42-205ENST00000465073 TCF24Q7RTU0 167 aa16.72■□□□□ 0.27
USP42-205ENST00000465073 RPP25LQ8N5L8 163 aaKnown RBP16.72■□□□□ 0.27
USP42-205ENST00000465073 MRGPRFQ96AM1 343 aa16.72■□□□□ 0.27
USP42-205ENST00000465073 MFFQ9GZY8 342 aa16.72■□□□□ 0.27
USP42-205ENST00000465073 IGHV3OR16-13A0A075B7E8 117 aa16.71■□□□□ 0.27
USP42-205ENST00000465073 IGHV3-74A0A0B4J1X5 117 aa16.71■□□□□ 0.27
USP42-205ENST00000465073 APOA1P02647 267 aa16.71■□□□□ 0.27
USP42-205ENST00000465073 TOMM20LQ6UXN7 152 aa16.71■□□□□ 0.27
USP42-205ENST00000465073 OR11H2Q8NH07 326 aa16.71■□□□□ 0.27
USP42-205ENST00000465073 C11orf68Q9H3H3 251 aaKnown RBP16.71■□□□□ 0.27
USP42-205ENST00000465073 RCVRNP35243 200 aa16.7■□□□□ 0.26
USP42-205ENST00000465073 NPBWR1P48145 328 aa16.7■□□□□ 0.26
USP42-205ENST00000465073 DUSP18Q8NEJ0 188 aa16.7■□□□□ 0.26
USP42-205ENST00000465073 C11orf45Q8TAV5 145 aa16.7■□□□□ 0.26
USP42-205ENST00000465073 VSIRQ9H7M9 311 aa16.7■□□□□ 0.26
USP42-205ENST00000465073 VCX3AQ9NNX9 186 aa16.7■□□□□ 0.26
USP42-205ENST00000465073 DFFBO76075 338 aa16.69■□□□□ 0.26
USP42-205ENST00000465073 SNX29P2Q8IUI4 249 aa16.69■□□□□ 0.26
USP42-205ENST00000465073 COMMD3Q9UBI1 195 aa16.69■□□□□ 0.26
USP42-205ENST00000465073 DNASE2O00115 360 aaPredicted RBP16.68■□□□□ 0.26
USP42-205ENST00000465073 ST8SIA3O43173 380 aa16.68■□□□□ 0.26
USP42-205ENST00000465073 IFNA4P05014 189 aa16.68■□□□□ 0.26
USP42-205ENST00000465073 SNCAP37840 140 aa16.68■□□□□ 0.26
USP42-205ENST00000465073 RBMS2Q15434 407 aaKnown RBP16.68■□□□□ 0.26
USP42-205ENST00000465073 ST8SIA2Q92186 375 aa16.68■□□□□ 0.26
USP42-205ENST00000465073 TRAV2A0A0B4J234 112 aa16.67■□□□□ 0.26
USP42-205ENST00000465073 NANOS2P60321 138 aaKnown RBP16.67■□□□□ 0.26
USP42-205ENST00000465073 ZNF600Q6ZNG1 722 aa16.67■□□□□ 0.26
USP42-205ENST00000465073 MS4A6AQ9H2W1 248 aa16.67■□□□□ 0.26
USP42-205ENST00000465073 FBXL17Q9UF56 701 aa16.67■□□□□ 0.26
USP42-205ENST00000465073 PUS1Q9Y606 427 aaKnown RBP eCLIP16.67■□□□□ 0.26
USP42-205ENST00000465073 INS-IGF2F8WCM5 200 aa16.67■□□□□ 0.26
USP42-205ENST00000465073 DEDDO75618 318 aa16.67■□□□□ 0.26
USP42-205ENST00000465073 CA1P00915 261 aaPredicted RBP16.67■□□□□ 0.26
USP42-205ENST00000465073 APOHP02749 345 aaPredicted RBP16.67■□□□□ 0.26
USP42-205ENST00000465073 RND3P61587 244 aa16.67■□□□□ 0.26
USP42-205ENST00000465073 LILRB2Q8N423 598 aa16.67■□□□□ 0.26
USP42-205ENST00000465073 A0A087WXM4 84 aa16.66■□□□□ 0.26
USP42-205ENST00000465073 TMEM50AO95807 157 aa16.66■□□□□ 0.26
USP42-205ENST00000465073 DEFB131AP59861 70 aa16.66■□□□□ 0.26
USP42-205ENST00000465073 RPL11P62913 178 aaKnown RBP16.66■□□□□ 0.26
USP42-205ENST00000465073 TMEM187Q14656 261 aa16.66■□□□□ 0.26
USP42-205ENST00000465073 IZUMO4Q1ZYL8 232 aa16.66■□□□□ 0.26
USP42-205ENST00000465073 SPINK9Q5DT21 86 aa16.66■□□□□ 0.26
USP42-205ENST00000465073 SLC35G3Q8N808 338 aa16.66■□□□□ 0.26
USP42-205ENST00000465073 ZNF486Q96H40 463 aaPredicted RBP16.66■□□□□ 0.26
USP42-205ENST00000465073 TMEM231Q9H6L2 316 aa16.66■□□□□ 0.26
USP42-205ENST00000465073 ZFAND3Q9H8U3 227 aa16.66■□□□□ 0.26
USP42-205ENST00000465073 CORTO00230 105 aa16.65■□□□□ 0.26
USP42-205ENST00000465073 ATG12O94817 140 aa16.65■□□□□ 0.26
USP42-205ENST00000465073 SUB1P53999 127 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP42-205ENST00000465073 PVRIGQ6DKI7 326 aa16.65■□□□□ 0.26
USP42-205ENST00000465073 A0A0B4J293 547 aa16.64■□□□□ 0.25
USP42-205ENST00000465073 IGHV3-66A0A0C4DH42 116 aa16.64■□□□□ 0.25
USP42-205ENST00000465073 M0QYG6 137 aa16.64■□□□□ 0.25
USP42-205ENST00000465073 IFNA17P01571 189 aa16.64■□□□□ 0.25
USP42-205ENST00000465073 IGKV1-5P01602 117 aa16.64■□□□□ 0.25
USP42-205ENST00000465073 P0C879 139 aa16.64■□□□□ 0.25
USP42-205ENST00000465073 PGAM2P15259 253 aa16.64■□□□□ 0.25
USP42-205ENST00000465073 ELK1P19419 428 aa16.64■□□□□ 0.25
USP42-205ENST00000465073 FRAS1Q86XX4 4008 aa16.64■□□□□ 0.25
USP42-205ENST00000465073 A0A1W2PS18 150 aa16.63■□□□□ 0.25
USP42-205ENST00000465073 NPPCP23582 126 aa16.63■□□□□ 0.25
USP42-205ENST00000465073 PIGPP57054 158 aa16.63■□□□□ 0.25
USP42-205ENST00000465073 TCTAP57738 103 aa16.63■□□□□ 0.25
USP42-205ENST00000465073 LEMD1Q68G75 181 aa16.63■□□□□ 0.25
USP42-205ENST00000465073 C2CD4CQ8TF44 421 aa16.63■□□□□ 0.25
USP42-205ENST00000465073 PDCD10Q9BUL8 212 aa16.63■□□□□ 0.25
USP42-205ENST00000465073 KMT2AQ03164 3969 aa16.63■□□□□ 0.25
USP42-205ENST00000465073 A0A1B0GU03 582 aa16.62■□□□□ 0.25
USP42-205ENST00000465073 PI3P19957 117 aa16.62■□□□□ 0.25
USP42-205ENST00000465073 AKR1C2P52895 323 aa16.62■□□□□ 0.25
USP42-205ENST00000465073 STHQ8IWL8 128 aa16.62■□□□□ 0.25
USP42-205ENST00000465073 TP53RKQ96S44 253 aa16.62■□□□□ 0.25
USP42-205ENST00000465073 RABAC1Q9UI14 185 aa16.62■□□□□ 0.25
USP42-205ENST00000465073 DEFB4AO15263 64 aa16.61■□□□□ 0.25
USP42-205ENST00000465073 HPGDSO60760 199 aa16.61■□□□□ 0.25
USP42-205ENST00000465073 RNASE2P10153 161 aaKnown RBP16.61■□□□□ 0.25
USP42-205ENST00000465073 NCS1P62166 190 aa16.61■□□□□ 0.25
USP42-205ENST00000465073 RNASE10Q5GAN6 216 aaKnown RBP16.61■□□□□ 0.25
USP42-205ENST00000465073 LHFPL1Q86WI0 220 aa16.61■□□□□ 0.25
USP42-205ENST00000465073 C3orf85A0A1B0GTC6 90 aa16.61■□□□□ 0.25
USP42-205ENST00000465073 VBP1P61758 197 aa16.61■□□□□ 0.25
USP42-205ENST00000465073 ARRDC1Q8N5I2 433 aa16.61■□□□□ 0.25
USP42-205ENST00000465073 FAM24BQ8N5W8 94 aa16.61■□□□□ 0.25
USP42-205ENST00000465073 FUNDC2Q9BWH2 189 aa16.61■□□□□ 0.25
USP42-205ENST00000465073 CLN5O75503 358 aa16.6■□□□□ 0.25
USP42-205ENST00000465073 SCGB2A1O75556 95 aa16.6■□□□□ 0.25
USP42-205ENST00000465073 TNFAIP8O95379 198 aa16.6■□□□□ 0.25
USP42-205ENST00000465073 TBPP20226 339 aa16.6■□□□□ 0.25
USP42-205ENST00000465073 ETV6P41212 452 aa16.6■□□□□ 0.25
USP42-205ENST00000465073 RPL5P46777 297 aaKnown RBP16.6■□□□□ 0.25
USP42-205ENST00000465073 HOXA1P49639 335 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms