RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 NRGNQ92686 78 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 RCC1LQ96I51 464 aaKnown RBP11.67□□□□□ -0.54
HDAC6-213ENST00000462730 ARHGAP32A7KAX9 2087 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 CSMD2Q7Z408 3487 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 C17orf112F2Z3M2 114 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 TRGC2P03986 189 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 RD3LP0DJH9 198 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 BCL2P10415 239 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 ZFP36P26651 326 aaKnown RBP11.67□□□□□ -0.54
HDAC6-213ENST00000462730 ATP5J2P56134 94 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 KLRD1Q13241 179 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 LCN15Q6UWW0 184 aa11.67□□□□□ -0.54
HDAC6-213ENST00000462730 ZNF430Q9H8G1 570 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-213ENST00000462730 ZFP92A6NM28 416 aa11.66□□□□□ -0.54
HDAC6-213ENST00000462730 LY6LH3BQJ8 138 aa11.66□□□□□ -0.54
HDAC6-213ENST00000462730 LGALS7P47929 136 aa11.66□□□□□ -0.54
HDAC6-213ENST00000462730 SSX2Q16385 188 aa11.66□□□□□ -0.54
HDAC6-213ENST00000462730 ZNF787Q6DD87 383 aa11.66□□□□□ -0.54
HDAC6-213ENST00000462730 OR10W1Q8NGF6 305 aa11.66□□□□□ -0.54
HDAC6-213ENST00000462730 MBD3L1Q8WWY6 194 aa11.66□□□□□ -0.54
HDAC6-213ENST00000462730 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
HDAC6-213ENST00000462730 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
HDAC6-213ENST00000462730 TNCP24821 2201 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 TACC2O95359 2948 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 IGKV1D-33P01593 117 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 IGKV1-33P01594 117 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 PAX1P15863 534 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 PRTN3P24158 256 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 TPTE2P1Q5T6R2 138 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 TREML4Q6UXN2 200 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 OR11H6Q8NGC7 330 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 FAM168AQ92567 244 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 NEU1Q99519 415 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.54
HDAC6-213ENST00000462730 ASH1LQ9NR48 2969 aaKnown RBP11.65□□□□□ -0.54
HDAC6-213ENST00000462730 MBP02144 154 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 PLA2G2AP14555 144 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 CNTFRP26992 372 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 COL8A1P27658 744 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 RND2P52198 227 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 FGF8P55075 233 aaPredicted RBP11.65□□□□□ -0.55
HDAC6-213ENST00000462730 LMO4P61968 165 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 LCN2P80188 198 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 C10orf55Q5SWW7 151 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 HCP5Q6MZN7 132 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 CDPF1Q6NVV7 123 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 HIST3H2BBQ8N257 126 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 KIR3DL3Q8N743 410 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 PERPQ96FX8 193 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 FAM210BQ96KR6 192 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 NOL4LQ96MY1 436 aaPredicted RBP11.65□□□□□ -0.55
HDAC6-213ENST00000462730 C2orf88Q9BSF0 95 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 CTDSP1Q9GZU7 261 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 PRDM13Q9H4Q3 707 aa11.65□□□□□ -0.55
HDAC6-213ENST00000462730 A0A1W2PN81 502 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 A0A1W2PPI3 338 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 MAP1LC3B2A6NCE7 125 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 CLDN34H7C241 214 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 MPDU1O75352 247 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 RNASE2P10153 161 aaKnown RBP11.64□□□□□ -0.55
HDAC6-213ENST00000462730 HTR1DP28221 377 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 CHRNA7P36544 502 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 C2orf83Q53S99 150 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 ARSJQ5FYB0 599 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-213ENST00000462730 C9orf152Q5JTZ5 239 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 LDLRAD2Q5SZI1 272 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 GFI1BQ5VTD9 330 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 RPP25LQ8N5L8 163 aaKnown RBP11.64□□□□□ -0.55
HDAC6-213ENST00000462730 TEX45Q8NA69 505 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 OR10G9Q8NGN4 311 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 OR10G7Q8NGN6 311 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 OR10D4PQ8NGN7 298 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 RAB24Q969Q5 203 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 C14orf144Q96I85 54 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 MAP1LC3BQ9GZQ8 125 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 SLC25A22Q9H936 323 aa11.64□□□□□ -0.55
HDAC6-213ENST00000462730 SVEP1Q4LDE5 3571 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 A0A1B0GV90 55 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 A0A1W2PRD5 423 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 A0A1W2PRF3 423 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 A0A1W2PRM7 423 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 ODF3BA8MYP8 253 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 E7EUB6 86 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 TRGC1P0CF51 173 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 RAB4AP20338 218 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 DDTP30046 118 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 CLEC2AQ6UVW9 174 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 VMO1Q7Z5L0 202 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 RNASEH2CQ8TDP1 164 aaKnown RBP11.63□□□□□ -0.55
HDAC6-213ENST00000462730 C10orf105Q8TEF2 133 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 P2RX4Q99571 388 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 MGST2Q99735 147 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 GPR61Q9BZJ8 451 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 SLC39A9Q9NUM3 307 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 DPM3Q9P2X0 92 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 PITPNC1Q9UKF7 332 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 FBN2P35556 2912 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 CGB1A6NKQ9 187 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 ATP5IP56385 69 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-213ENST00000462730 BPIFB3P59826 476 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms